rs1799988

Orientation

plus

Stabilized

plus

Make rs1799988(C;C)

Make rs1799988(C;T)

Make rs1799988(T;T)

Reference

GRCh38 38.1/141

Chromosome

3

Position

46370768

Gene	CCR5, LOC102724297

is a	snp
is	mentioned by
dbSNP	rs1799988
dbSNP (classic)	rs1799988
ClinGen	rs1799988
ebi	rs1799988
HLI	rs1799988
Exac	rs1799988
Gnomad	rs1799988
Varsome	rs1799988
LitVar	rs1799988
Map	rs1799988
PheGenI	rs1799988
Biobank	rs1799988
1000 genomes	rs1799988
hgdp	rs1799988
ensembl	rs1799988
geneview	rs1799988
scholar	rs1799988
google	rs1799988
pharmgkb	rs1799988
gwascentral	rs1799988
openSNP	rs1799988
23andMe	rs1799988
SNPshot	rs1799988
SNPdbe	rs1799988
MSV3d	rs1799988
GWAS Ctlg	rs1799988

GMAF

0.4881

Max Magnitude

0

?	(C;C) (C;T) (T;T)	28

[PMID 20153665] Genetic variation at the CCR5/CCR2 gene cluster and risk of psoriasis and psoriatic arthritis

[PMID 16672419] Polymorphisms in the genes encoding chemokine receptor 5, interleukin-10, and monocyte chemoattractant protein 1 contribute to cytomegalovirus reactivation and disease after allogeneic stem cell transplantation.

[PMID 20041166] Common genetic variation and the control of HIV-1 in humans.

[PMID 20206716] Genetic variation within the gene encoding the HIV-1 CCR5 coreceptor in two South African populations.

[PMID 20487506] A whole genome association study of mother-to-child transmission of HIV in Malawi.

[PMID 20552027] Host and viral genetic correlates of clinical definitions of HIV-1 disease progression.

[PMID 23168091] Chemokine Ligand 5 (CCL5) and Chemokine Receptor (CCR5) Genetic Variants and Prostate Cancer Risk among men of African Descent: A Case-Control Study

[PMID 23150742] Myocardial chemokine expression and intensity of myocarditis in Chagas cardiomyopathy are controlled by polymorphisms in CXCL9 and CXCL10

[PMID 24463784] Variants in host viral replication cycle genes are associated with heterosexual HIV-1 acquisition in Africans