rs2070075
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in complete genomics |
| (C;T) | 0 | Apparently benign variant |
| (T;T) | 0 | Apparently benign variant |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 34648421 |
| Gene | GALT |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2070075 |
| dbSNP (classic) | rs2070075 |
| ClinGen | rs2070075 |
| ebi | rs2070075 |
| HLI | rs2070075 |
| Exac | rs2070075 |
| Gnomad | rs2070075 |
| Varsome | rs2070075 |
| LitVar | rs2070075 |
| Map | rs2070075 |
| PheGenI | rs2070075 |
| Biobank | rs2070075 |
| 1000 genomes | rs2070075 |
| hgdp | rs2070075 |
| ensembl | rs2070075 |
| geneview | rs2070075 |
| scholar | rs2070075 |
| rs2070075 | |
| pharmgkb | rs2070075 |
| gwascentral | rs2070075 |
| openSNP | rs2070075 |
| 23andMe | rs2070075 |
| SNPshot | rs2070075 |
| SNPdbe | rs2070075 |
| MSV3d | rs2070075 |
| GWAS Ctlg | rs2070075 |
| GMAF | 0.01607 |
| Max Magnitude | 0 |
rs2070075, also known as c.652C>T or p.Leu218=, is currently noted in ClinVar as being a benign variant (in the GALT gene).
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| ClinVar | |
|---|---|
| Risk | rs2070075(G;G) Rs2070075(T;T) |
| Alt | rs2070075(G;G) Rs2070075(T;T) |
| Reference | Rs2070075(C;C) |
| Significance | Other |
| Disease | Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not specified GALT POLYMORPHISM (LOS ANGELES not provided Galactosemia |
| Variation | info |
| Gene | GALT |
| CLNDBN | Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not specified GALT POLYMORPHISM (LOS ANGELES, D1) not provided Galactosemia |
| Reversed | 0 |
| HGVS | NC_000009.11:g.34648418C>G; NC_000009.11:g.34648418C>T |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000022175.1, RCV000337575.1, RCV000003804.2, RCV000032587.1, RCV000078233.6, RCV000298701.1, |
[PMID 10408771] Classical galactosemia and mutations at the galactose-1-phosphate uridyl transferase (GALT) gene.
[PMID 10424825
] Presence of a deletion in the 5' upstream region of the GALT gene in Duarte (D2) alleles.
