rs2160525
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in complete genomics |
| Make rs2160525(A;A) |
| Make rs2160525(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 12 |
| Position | 12117356 |
| Gene | LRP6 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2160525 |
| dbSNP (classic) | rs2160525 |
| ClinGen | rs2160525 |
| ebi | rs2160525 |
| HLI | rs2160525 |
| Exac | rs2160525 |
| Gnomad | rs2160525 |
| Varsome | rs2160525 |
| LitVar | rs2160525 |
| Map | rs2160525 |
| PheGenI | rs2160525 |
| Biobank | rs2160525 |
| 1000 genomes | rs2160525 |
| hgdp | rs2160525 |
| ensembl | rs2160525 |
| geneview | rs2160525 |
| scholar | rs2160525 |
| rs2160525 | |
| pharmgkb | rs2160525 |
| gwascentral | rs2160525 |
| openSNP | rs2160525 |
| 23andMe | rs2160525 |
| SNPshot | rs2160525 |
| SNPdbe | rs2160525 |
| MSV3d | rs2160525 |
| GWAS Ctlg | rs2160525 |
| GMAF | 0.1373 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| Rs2160525 | |
|---|---|
| PubMed | [PMID 17517621 |
| Affy Probeset | SNP_A-1861148 |
| Affy Orientation | same |
| On GW 5.0 | 1 |
| Alleles A/B | A/G |
| Ancestral | G |
| Population | Caucasian |
| Allele | G |
| Case Freq. | 0.85 |
| Control Freq. | 0.81 |
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 1.30 |
| Disease | Alzheimer's disease, late-onset (LOAD) |
rs2160525 is in linkage disequilibrium with a polymorphism that increases susceptibility to late-onset Alzheimer's disease (LOAD) 1.30 times for carriers of the G allele. [PMID 17517621
]
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 12
- Has genotype
- Has population
- Has Report GE
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Affy500k
- On chip Ancestry v2
- On chip FTDNA2
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d
