rs2340690
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs2340690(C;C) |
| Make rs2340690(C;T) |
| Make rs2340690(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 197496162 |
| Gene | HSPD1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2340690 |
| dbSNP (classic) | rs2340690 |
| ClinGen | rs2340690 |
| ebi | rs2340690 |
| HLI | rs2340690 |
| Exac | rs2340690 |
| Gnomad | rs2340690 |
| Varsome | rs2340690 |
| LitVar | rs2340690 |
| Map | rs2340690 |
| PheGenI | rs2340690 |
| Biobank | rs2340690 |
| 1000 genomes | rs2340690 |
| hgdp | rs2340690 |
| ensembl | rs2340690 |
| geneview | rs2340690 |
| scholar | rs2340690 |
| rs2340690 | |
| pharmgkb | rs2340690 |
| gwascentral | rs2340690 |
| openSNP | rs2340690 |
| 23andMe | rs2340690 |
| SNPshot | rs2340690 |
| SNPdbe | rs2340690 |
| MSV3d | rs2340690 |
| GWAS Ctlg | rs2340690 |
| GMAF | 0.1726 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 18320357
] G-C-T-C haplotype of rs2340690-rs788016-rs2305560-rs2565163 has odds ratio of 1.91 (CI: 1.26-2.89, p=0.002) for coronary heart disease compared to G-T-T-C, based on a study of 1,000 Han Chinese patients and matched controls.
- Note: Haplotype allele assignments may not be in dbSNP orientation.
[PMID 17925998] HSPD1 is not a major susceptibility gene for rheumatoid arthritis in the French Caucasian population.
