rs267606950
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 5 | Alpha1-anti-trypsin deficient homozygote; emphysema possible |
(-;C) | 3 | carrier for Alpha-1 Antitrypsin Deficiency |
(C;C) | 0 | common/normal |
Reference | GRCh38.p7 38.3/150 |
Chromosome | 14 |
Position | 94382686 |
Gene | SERPINA1 |
is a | snp |
is | mentioned by |
dbSNP | rs267606950 |
dbSNP (classic) | rs267606950 |
ClinGen | rs267606950 |
ebi | rs267606950 |
HLI | rs267606950 |
Exac | rs267606950 |
Gnomad | rs267606950 |
Varsome | rs267606950 |
LitVar | rs267606950 |
Map | rs267606950 |
PheGenI | rs267606950 |
Biobank | rs267606950 |
1000 genomes | rs267606950 |
hgdp | rs267606950 |
ensembl | rs267606950 |
geneview | rs267606950 |
scholar | rs267606950 |
rs267606950 | |
pharmgkb | rs267606950 |
gwascentral | rs267606950 |
openSNP | rs267606950 |
23andMe | rs267606950 |
SNPshot | rs267606950 |
SNPdbe | rs267606950 |
MSV3d | rs267606950 |
GWAS Ctlg | rs267606950 |
Max Magnitude | 5 |
c.552delC (p.Tyr184Terfs, Y160X, p.Tyr160Ter); also known as PI null (Granite Falls). OMIM indicates emphysema is associated with homozygosity.
Note: a 2018 publication lists this variant as pathogenic for several cancer types.[PMID 29625052]
ClinVar | |
---|---|
Risk | Rs267606950(-;-) |
Alt | Rs267606950(-;-) |
Reference | Rs267606950(C;C) |
Significance | Other |
Disease | Alpha-1-antitrypsin deficiency PI Q0(GRANITE FALLS) |
Variation | info |
Gene | SERPINA1 |
CLNDBN | Alpha-1-antitrypsin deficiency PI Q0(GRANITE FALLS) |
Reversed | 1 |
HGVS | NC_000014.8:g.94849023delG |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000019579.5, RCV000019580.2, |