rs2697962
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 2 | Increased risk of developing Parkinson's Disease |
| (A;G) | 1.5 | Slightly increased risk of developing Parkinson's Disease |
| (C;C) | 0 | |
| (G;G) | 1 | Normal risk of developing Parkinson's Disease |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 13824497 |
| Gene | PRDM2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2697962 |
| dbSNP (classic) | rs2697962 |
| ClinGen | rs2697962 |
| ebi | rs2697962 |
| HLI | rs2697962 |
| Exac | rs2697962 |
| Gnomad | rs2697962 |
| Varsome | rs2697962 |
| LitVar | rs2697962 |
| Map | rs2697962 |
| PheGenI | rs2697962 |
| Biobank | rs2697962 |
| 1000 genomes | rs2697962 |
| hgdp | rs2697962 |
| ensembl | rs2697962 |
| geneview | rs2697962 |
| scholar | rs2697962 |
| rs2697962 | |
| pharmgkb | rs2697962 |
| gwascentral | rs2697962 |
| openSNP | rs2697962 |
| 23andMe | rs2697962 |
| SNPshot | rs2697962 |
| SNPdbe | rs2697962 |
| MSV3d | rs2697962 |
| GWAS Ctlg | rs2697962 |
| GMAF | 0.1561 |
| Max Magnitude | 2 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| Rs2697962 | |
|---|---|
| PubMed | [PMID 16252231 |
| Affy Probeset | SNP_A-8401263 |
| Affy Orientation | reverse |
| On GW 5.0 | |
| Alleles A/B | C/T |
| Ancestral | A |
| Population | |
| Allele | A |
| Case Freq. | |
| Control Freq. | |
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 1.67 |
| Disease | Parkinson's disease (PKD) |
rs2697962 is in linkage disequilibrium with a polymorphism that increases susceptibility to Parkinson's disease 1.67 times for carriers of the A allele [PMID 16252231
]
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 1
- Has genotype
- Has population
- Has Report GE
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip Ancestry v2c
- On chip Ancestry v2d
