rs3092856
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in complete genomics |
Make rs3092856(C;T) |
Make rs3092856(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 108289005 |
Gene | ATM |
is a | snp |
is | mentioned by |
dbSNP | rs3092856 |
dbSNP (classic) | rs3092856 |
ClinGen | rs3092856 |
ebi | rs3092856 |
HLI | rs3092856 |
Exac | rs3092856 |
Gnomad | rs3092856 |
Varsome | rs3092856 |
LitVar | rs3092856 |
Map | rs3092856 |
PheGenI | rs3092856 |
Biobank | rs3092856 |
1000 genomes | rs3092856 |
hgdp | rs3092856 |
ensembl | rs3092856 |
geneview | rs3092856 |
scholar | rs3092856 |
rs3092856 | |
pharmgkb | rs3092856 |
gwascentral | rs3092856 |
openSNP | rs3092856 |
23andMe | rs3092856 |
SNPshot | rs3092856 |
SNPdbe | rs3092856 |
MSV3d | rs3092856 |
GWAS Ctlg | rs3092856 |
GMAF | 0.01974 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
This SNP, a variant in the ATM gene, is 1 of 25 SNPs reported to represent independently minor, but cumulatively significant, increased risk for breast cancer. [PMID 17341484]
For details of all 25 SNPs in this group, along with the two methods used to calculate overall risk estimates for breast cancer, refer to the SNPedia breast cancer entry.
For this particular SNP, the risk (minor) allele is (T).
[PMID 20232390] Genetic variations of DNA repair genes and their prognostic significance in patients with acute myeloid leukemia
[PMID 18638378] Analysis of variants in DNA damage signalling genes in bladder cancer.
ClinVar | |
---|---|
Risk | rs3092856(T;T) |
Alt | rs3092856(T;T) |
Reference | Rs3092856(C;C) |
Significance | Other |
Disease | not specified Hereditary cancer-predisposing syndrome Ataxia-telangiectasia syndrome |
Variation | info |
Gene | ATM |
CLNDBN | not specified Hereditary cancer-predisposing syndrome Ataxia-telangiectasia syndrome |
Reversed | 0 |
HGVS | NC_000011.9:g.108159732C>T |
CLNSRC | UniProtKB (protein) |
CLNACC | RCV000120137.3, RCV000128897.2, RCV000284881.1, |