rs3129882
| Orientation | plus |
| Stabilized | plus |
| Make rs3129882(A;A) |
| Make rs3129882(A;G) |
| Make rs3129882(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 32441753 |
| Gene | HLA-DRA |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3129882 |
| dbSNP (classic) | rs3129882 |
| ClinGen | rs3129882 |
| ebi | rs3129882 |
| HLI | rs3129882 |
| Exac | rs3129882 |
| Gnomad | rs3129882 |
| Varsome | rs3129882 |
| LitVar | rs3129882 |
| Map | rs3129882 |
| PheGenI | rs3129882 |
| Biobank | rs3129882 |
| 1000 genomes | rs3129882 |
| hgdp | rs3129882 |
| ensembl | rs3129882 |
| geneview | rs3129882 |
| scholar | rs3129882 |
| rs3129882 | |
| pharmgkb | rs3129882 |
| gwascentral | rs3129882 |
| openSNP | rs3129882 |
| 23andMe | rs3129882 |
| SNPshot | rs3129882 |
| SNPdbe | rs3129882 |
| MSV3d | rs3129882 |
| GWAS Ctlg | rs3129882 |
| GMAF | 0.4697 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 20711177
] Common genetic variation in the HLA region is associated with late-onset sporadic Parkinson's disease
[PMID 21791235] HLA rs3129882 variant in Chinese Han patients with late-onset sporadic Parkinson disease
| GWAS snp | |
|---|---|
| PMID | [PMID 21779181]
|
| Trait | |
| Title | Identification of novel genetic markers associated with clinical phenotypes of systemic sclerosis through a genome-wide association strategy. |
| Risk Allele | |
| P-val | 2E-27 |
| Odds Ratio | 2.1700 [1.88-2.50] |
[PMID 22451204] Meta-analysis of Parkinson's disease: identification of a novel locus, RIT2
[PMID 22243834] Genetic analysis of HLA-DRA region variation in Taiwanese Parkinson's disease.
[PMID 19936222] Forty-three loci associated with plasma lipoprotein size, concentration, and cholesterol content in genome-wide analysis.
[PMID 20018063] Detecting significant single-nucleotide polymorphisms in a rheumatoid arthritis study using random forests.
[PMID 20018067] A two-stage search strategy for detecting multiple loci associated with rheumatoid arthritis.
[PMID 20018081] Assessment of gene-covariate interactions by incorporating covariates into association mapping.
[PMID 21482477] Human leukocyte antigen variation and Parkinson's disease.
[PMID 24183452] Association of Parkinson Disease with Structural and Regulatory Variants in the HLA Region
[PMID 23083294] Association of HLA locus variant in Parkinson's disease.
[PMID 23543094] Testing for associations between loci and environmental gradients using latent factor mixed models.
[PMID 23579001] The HLA-DRA variation rs3129882 is not associated with Parkinson's disease in Sweden.
| GWAS snp | |
|---|---|
| PMID | [PMID 24511991]
|
| Trait | Parkinson's disease |
| Title | Identification of a novel Parkinson's disease locus via stratified genome-wide association study. |
| Risk Allele | G |
| P-val | 3E-8 |
| Odds Ratio | 1.31 [1.19-1.43] |
[PMID 25720714] Association between HLA rs3129882 polymorphism and Parkinson's disease: a meta-analysis
[PMID 32253955] The rs3129882/rs4248166 in HLA-DRA and rs34372695 in SYT 11 are not associated with sporadic Parkinson's disease in central Chinese population.
