rs3130544
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 |
| Make rs3130544(A;A) |
| Make rs3130544(A;C) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 31090563 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3130544 |
| dbSNP (classic) | rs3130544 |
| ClinGen | rs3130544 |
| ebi | rs3130544 |
| HLI | rs3130544 |
| Exac | rs3130544 |
| Gnomad | rs3130544 |
| Varsome | rs3130544 |
| LitVar | rs3130544 |
| Map | rs3130544 |
| PheGenI | rs3130544 |
| Biobank | rs3130544 |
| 1000 genomes | rs3130544 |
| hgdp | rs3130544 |
| ensembl | rs3130544 |
| geneview | rs3130544 |
| scholar | rs3130544 |
| rs3130544 | |
| pharmgkb | rs3130544 |
| gwascentral | rs3130544 |
| openSNP | rs3130544 |
| 23andMe | rs3130544 |
| SNPshot | rs3130544 |
| SNPdbe | rs3130544 |
| MSV3d | rs3130544 |
| GWAS Ctlg | rs3130544 |
| GMAF | 0.03719 |
| Max Magnitude | 0 |
| ? | (A;A) (A;C) (C;C) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23263863 |
| Trait | Hematology traits |
| Title | GWAS of blood cell traits identifies novel associated loci and epistatic interactions in Caucasian and African-American children. |
| Risk Allele | A |
| P-val | 5E-7 |
| Odds Ratio | .02 [0.011-0.026] unit decrease |
| GWAS snp | |
|---|---|
| PMID | [PMID 23055271 |
| Trait | Myasthenia gravis |
| Title | Risk for myasthenia gravis maps to a (151) Pro→Ala change in TNIP1 and to human leukocyte antigen-B*08. |
| Risk Allele | A |
| P-val | 2E-90 |
| Odds Ratio | 5.64 [4.77-6.67] |
[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.
[PMID 20017995
] A principal-components-based clustering method to identify multiple variants associated with rheumatoid arthritis and arthritis-related autoantibodies.
[PMID 20064070
] Multistage genomewide association study identifies a locus at 1q41 associated with rate of HIV-1 disease progression to clinical AIDS.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 6
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d
