rs348594
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs348594(A;A) |
| Make rs348594(A;G) |
| Make rs348594(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 5 |
| Position | 40323836 |
| Gene | LOC105374736 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs348594 |
| dbSNP (classic) | rs348594 |
| ClinGen | rs348594 |
| ebi | rs348594 |
| HLI | rs348594 |
| Exac | rs348594 |
| Gnomad | rs348594 |
| Varsome | rs348594 |
| LitVar | rs348594 |
| Map | rs348594 |
| PheGenI | rs348594 |
| Biobank | rs348594 |
| 1000 genomes | rs348594 |
| hgdp | rs348594 |
| ensembl | rs348594 |
| geneview | rs348594 |
| scholar | rs348594 |
| rs348594 | |
| pharmgkb | rs348594 |
| gwascentral | rs348594 |
| openSNP | rs348594 |
| 23andMe | rs348594 |
| SNPshot | rs348594 |
| SNPdbe | rs348594 |
| MSV3d | rs348594 |
| GWAS Ctlg | rs348594 |
| GMAF | 0.4917 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| Rs348594 | |
|---|---|
| PubMed | [PMID 17447842 ]
|
| Affy Probeset | SNP_A-8391321 |
| Affy Orientation | same |
| On GW 5.0 | 0 |
| Alleles A/B | A/G |
| Ancestral | G |
| Population | EU |
| Allele | A |
| Case Freq. | 0.67 |
| Control Freq. | 0.6 |
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 1.36 |
| Disease | Crohn's disease (CD) |
rs348594 is in linkage disequilibrium with a polymorphism that increases susceptibility to Crohn's disease 1.36 times for carriers of the A allele [PMID 17447842]
