rs3731249
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| Make rs3731249(A;A) |
| Make rs3731249(A;G) |
| Reference | GRCh38.p2 38.2/144 |
| Chromosome | 9 |
| Position | 21970917 |
| Gene | CDKN2A |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3731249 |
| dbSNP (classic) | rs3731249 |
| ClinGen | rs3731249 |
| ebi | rs3731249 |
| HLI | rs3731249 |
| Exac | rs3731249 |
| Gnomad | rs3731249 |
| Varsome | rs3731249 |
| LitVar | rs3731249 |
| Map | rs3731249 |
| PheGenI | rs3731249 |
| Biobank | rs3731249 |
| 1000 genomes | rs3731249 |
| hgdp | rs3731249 |
| ensembl | rs3731249 |
| geneview | rs3731249 |
| scholar | rs3731249 |
| rs3731249 | |
| pharmgkb | rs3731249 |
| gwascentral | rs3731249 |
| openSNP | rs3731249 |
| 23andMe | rs3731249 |
| SNPshot | rs3731249 |
| SNPdbe | rs3731249 |
| MSV3d | rs3731249 |
| GWAS Ctlg | rs3731249 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 26104880
] Inherited coding variants at the CDKN2A locus influence susceptibility to acute lymphoblastic leukaemia in children
| ClinVar | |
|---|---|
| Risk | rs3731249(A;A) rs3731249(T;T) |
| Alt | rs3731249(A;A) rs3731249(T;T) |
| Reference | Rs3731249(G;G) |
| Significance | Non-pathogenic |
| Disease | Hereditary cutaneous melanoma not provided not specified Hereditary cancer-predisposing syndrome Melanoma-pancreatic cancer syndrome |
| Variation | info |
| Gene | CDKN2A |
| CLNDBN | Hereditary cutaneous melanoma not provided not specified Hereditary cancer-predisposing syndrome Melanoma-pancreatic cancer syndrome |
| Reversed | 1 |
| HGVS | NC_000009.11:g.21970916C>A; NC_000009.11:g.21970916C>T |
| CLNSRC | HGMD UniProtKB (protein) |
| CLNACC | RCV000466987.1, RCV000034482.3, RCV000078114.6, RCV000119155.4, RCV000157755.3, RCV000412408.1, |
[PMID 26463672
] The 9p21.3 risk of childhood acute lymphoblastic leukaemia is explained by a rare high-impact variant in CDKN2A
[PMID 26527286
] A Heritable Missense Polymorphism in CDKN2A Confers Strong Risk of Childhood Acute Lymphoblastic Leukemia and Is Preferentially Selected during Clonal Evolution
