rs3737787
| Orientation | minus |
| Stabilized | minus |
| Make rs3737787(C;C) |
| Make rs3737787(C;T) |
| Make rs3737787(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 161039733 |
| Gene | TSTD1, USF1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3737787 |
| dbSNP (classic) | rs3737787 |
| ClinGen | rs3737787 |
| ebi | rs3737787 |
| HLI | rs3737787 |
| Exac | rs3737787 |
| Gnomad | rs3737787 |
| Varsome | rs3737787 |
| LitVar | rs3737787 |
| Map | rs3737787 |
| PheGenI | rs3737787 |
| Biobank | rs3737787 |
| 1000 genomes | rs3737787 |
| hgdp | rs3737787 |
| ensembl | rs3737787 |
| geneview | rs3737787 |
| scholar | rs3737787 |
| rs3737787 | |
| pharmgkb | rs3737787 |
| gwascentral | rs3737787 |
| openSNP | rs3737787 |
| 23andMe | rs3737787 |
| SNPshot | rs3737787 |
| SNPdbe | rs3737787 |
| MSV3d | rs3737787 |
| GWAS Ctlg | rs3737787 |
| GMAF | 0.2158 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 17673701] contributes to high serum lipid levels in Dutch familial combined hyperlipidemia families and U.S. whites with coronary artery disease
[PMID 19750004
] A systems genetics approach implicates USF1, FADS3, and other causal candidate genes for familial combined hyperlipidemia
[PMID 15657872] Association testing in a linked region using large pedigrees.
[PMID 15959806] Upstream stimulatory factor 1 associated with familial combined hyperlipidemia, LDL cholesterol, and triglycerides.
[PMID 15976322] Familial combined hyperlipidemia in Mexicans: association with upstream transcription factor 1 and linkage on chromosome 16q24.1.
[PMID 16132950] The linkage and association of the gene encoding upstream stimulatory factor 1 with type 2 diabetes and metabolic syndrome in the Chinese population.
[PMID 16186412] Common polymorphisms in the USF1 gene are not associated with type 2 diabetes in French Caucasians.
[PMID 16936202] Variation within the gene encoding the upstream stimulatory factor 1 does not influence susceptibility to type 2 diabetes in samples from populations with replicated evidence of linkage to chromosome 1q.
[PMID 18067551] Association of F11 receptor gene polymorphisms with central obesity and blood pressure.
[PMID 18276913] Association analysis of allelic variants of USF1 in coronary atherosclerosis.
[PMID 18303204] Body mass index is associated with USF1 haplotype in Korean premenopausal women.
[PMID 18445538] Upstream transcription factor 1 (USF1) in risk of type 2 diabetes: association study in 2000 Dutch Caucasians.
[PMID 18577828] Allelic variants of upstream transcription factor 1 associate with carotid artery intima-media thickness: the Cardiovascular Risk in Young Finns study.
[PMID 18593823] Genetic variants in the USF1 gene are associated with low-density lipoprotein cholesterol levels and incident type 2 diabetes mellitus in women: results from the MONICA/KORA Augsburg case-cohort study, 1984-2002.
| ClinVar | |
|---|---|
| Risk | rs3737787(T;T) |
| Alt | rs3737787(T;T) |
| Reference | rs3737787(C;C) |
| Significance | Other |
| Disease | Hyperlipidemia |
| Variation | info |
| Gene | TSTD1 USF1 |
| CLNDBN | Hyperlipidemia, familial combined, susceptibility to |
| Reversed | 1 |
| HGVS | NC_000001.10:g.161009523G>A |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000013088.3, |
[PMID 26052935] Association between single nucleotide polymorphisms of upstream transcription factor 1 (USF1) and susceptibility to papillary thyroid cancer
[PMID 26068452] The rs2516839 Polymorphism of the USF1 Gene May Modulate Serum Triglyceride Levels in Response to Cigarette Smoking
[PMID 29598907] Upstream Stimulating Factor 1 (USF-1) Gene Polymorphisms and the Risk, Symptoms, and Outcome of Pediatric Ischemic Stroke.
[PMID 33307180] Polymorphism rs3737787 of Upstream Stimulatory Factor 1 Gene is Associated with Serum Lipid Phenotype in Nigerian Population.
