rs3788964

minus

Geno	Mag	Summary
(T;T)	0

Make rs3788964(A;A)

Make rs3788964(A;G)

Make rs3788964(G;G)

Reference

GRCh38 38.1/141

Chromosome

2

Position

162350970

Gene

GCA

is a	snp
is	mentioned by
dbSNP	rs3788964
dbSNP (classic)	rs3788964
ClinGen	rs3788964
ebi	rs3788964
HLI	rs3788964
Exac	rs3788964
Gnomad	rs3788964
Varsome	rs3788964
LitVar	rs3788964
Map	rs3788964
PheGenI	rs3788964
Biobank	rs3788964
1000 genomes	rs3788964
hgdp	rs3788964
ensembl	rs3788964
geneview	rs3788964
scholar	rs3788964
google	rs3788964
pharmgkb	rs3788964
gwascentral	rs3788964
openSNP	rs3788964
23andMe	rs3788964
SNPshot	rs3788964
SNPdbe	rs3788964
MSV3d	rs3788964
GWAS Ctlg	rs3788964

GMAF

0.1506

Max Magnitude

0

?

(A;A) (A;G) (G;G)

28

Rs3788964
PubMed	[PMID 17554300 ]
Affy Probeset	SNP_A-1876213
Affy Orientation	reverse
On GW 5.0	1
Alleles A/B	C/T
Ancestral	A
Population
Allele
Case Freq.
Control Freq.
Odds Ratio Het
Odds Ratio Hom
Odds Ratio All
Disease	Type I Diabetes (T1D)

[PMID 18853133 ] Gene variants influencing measures of inflammation or predisposing to autoimmune and inflammatory diseases are not associated with the risk of type 2 diabetes.

[PMID 18927125 ] IFIH1 polymorphisms are significantly associated with type 1 diabetes and IFIH1 gene expression in peripheral blood mononuclear cells.

[PMID 19956101 ] Overview of the Rapid Response data.

[PMID 19956106 ] Analysis of 19 genes for association with type I diabetes in the Type I Diabetes Genetics Consortium families.

[PMID 19956109 ] The Type I Diabetes Genetics Consortium 'Rapid Response' family-based candidate gene study: strategy, genes selection, and main outcome.