rs3804505
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common on affy axiom data |
| (C;T) | ? | |
| (T;T) | 2 | rare, related to myoclonic epilepsy |
| Reference | GRCh38 38.1/142 |
| Chromosome | 6 |
| Position | 52438563 |
| Gene | EFHC1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3804505 |
| dbSNP (classic) | rs3804505 |
| ClinGen | rs3804505 |
| ebi | rs3804505 |
| HLI | rs3804505 |
| Exac | rs3804505 |
| Gnomad | rs3804505 |
| Varsome | rs3804505 |
| LitVar | rs3804505 |
| Map | rs3804505 |
| PheGenI | rs3804505 |
| Biobank | rs3804505 |
| 1000 genomes | rs3804505 |
| hgdp | rs3804505 |
| ensembl | rs3804505 |
| geneview | rs3804505 |
| scholar | rs3804505 |
| rs3804505 | |
| pharmgkb | rs3804505 |
| gwascentral | rs3804505 |
| openSNP | rs3804505 |
| 23andMe | rs3804505 |
| SNPshot | rs3804505 |
| SNPdbe | rs3804505 |
| MSV3d | rs3804505 |
| GWAS Ctlg | rs3804505 |
| GMAF | 0.04362 |
| Max Magnitude | 2 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| ClinVar | |
|---|---|
| Risk | rs3804505(A;A) Rs3804505(T;T) |
| Alt | rs3804505(A;A) Rs3804505(T;T) |
| Reference | Rs3804505(C;C) |
| Significance | Other |
| Disease | Myoclonic epilepsy not specified |
| Variation | info |
| Gene | EFHC1 |
| CLNDBN | Myoclonic epilepsy, juvenile 1 not specified |
| Reversed | 1 |
| HGVS | NC_000006.11:g.52303361G>A |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000002144.3, RCV000116950.3, |
[PMID 18823326
] DNA variants in coding region of EFHC1: SNPs do not associate with juvenile myoclonic epilepsy.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 6
- Has genotype
- Has population
- Uses omim
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d
