rs3824662
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common/normal |
| Make rs3824662(G;T) |
| Make rs3824662(T;T) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 10 |
| Position | 8062245 |
| Gene | GATA3 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3824662 |
| dbSNP (classic) | rs3824662 |
| ClinGen | rs3824662 |
| ebi | rs3824662 |
| HLI | rs3824662 |
| Exac | rs3824662 |
| Gnomad | rs3824662 |
| Varsome | rs3824662 |
| LitVar | rs3824662 |
| Map | rs3824662 |
| PheGenI | rs3824662 |
| Biobank | rs3824662 |
| 1000 genomes | rs3824662 |
| hgdp | rs3824662 |
| ensembl | rs3824662 |
| geneview | rs3824662 |
| scholar | rs3824662 |
| rs3824662 | |
| pharmgkb | rs3824662 |
| gwascentral | rs3824662 |
| openSNP | rs3824662 |
| 23andMe | rs3824662 |
| SNPshot | rs3824662 |
| SNPdbe | rs3824662 |
| MSV3d | rs3824662 |
| GWAS Ctlg | rs3824662 |
| GMAF | 0.2158 |
| Max Magnitude | 0 |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 24141364
] Inherited GATA3 variants are associated with Ph-like childhood acute lymphoblastic leukemia and risk of relapse
| GWAS snp | |
|---|---|
| PMID | [PMID 23996088] |
| Trait | Acute lymphoblastic leukemia (B-cell precursor) |
| Title | Variation at 10p12.2 and 10p14 influences risk of childhood B-cell acute lymphoblastic leukemia and phenotype. |
| Risk Allele | T |
| P-val | 9E-12 |
| Odds Ratio | 1.31 [1.21-1.41] |
[PMID 25468567] A genome-wide association study of susceptibility to acute lymphoblastic leukemia in adolescents and young adults
[PMID 26575185] Somatic Mutation Allelic Ratio Test Using ddPCR (SMART-ddPCR): An Accurate Method for Assessment of Preferential Allelic Imbalance in Tumor DNA
[PMID 30044774] Genetic variation of the transcription factor GATA3, not STAT4, is associated with the risk of type 2 diabetes in the Bangladeshi population.
[PMID 30301440] GATA3 rs3824662 gene polymorphism as possible risk factor for systemic lupus erythematosus.
