rs398122988
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (-;CTCAA) | 5 | Lowered risk (0.6x) of coronary artery disease |
| (AACTC;AACTC) | 0 | common in clinvar |
| (CTCAA;CTCAA) | 0 | common in clinvar |
| Make rs398122988(-;-) |
| Reference | GRCh38.p7 38.3/150 |
| Chromosome | 1 |
| Position | 62597929 |
| Gene | ANGPTL3, DOCK7 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs398122988 |
| dbSNP (classic) | rs398122988 |
| ClinGen | rs398122988 |
| ebi | rs398122988 |
| HLI | rs398122988 |
| Exac | rs398122988 |
| Gnomad | rs398122988 |
| Varsome | rs398122988 |
| LitVar | rs398122988 |
| Map | rs398122988 |
| PheGenI | rs398122988 |
| Biobank | rs398122988 |
| 1000 genomes | rs398122988 |
| hgdp | rs398122988 |
| ensembl | rs398122988 |
| geneview | rs398122988 |
| scholar | rs398122988 |
| rs398122988 | |
| pharmgkb | rs398122988 |
| gwascentral | rs398122988 |
| openSNP | rs398122988 |
| 23andMe | rs398122988 |
| SNPshot | rs398122988 |
| SNPdbe | rs398122988 |
| MSV3d | rs398122988 |
| GWAS Ctlg | rs398122988 |
| Merged from | Rs569107562 |
| Max Magnitude | 5 |
ANGPTL3, c.363_367delCTCAA (p.Asn121Lysfs)
| ClinVar | |
|---|---|
| Risk | rs398122988(-;-) Rs398122988(AACTC;AACTC) |
| Alt | rs398122988(-;-) Rs398122988(AACTC;AACTC) |
| Reference | Rs398122988(CTCAA;CTCAA) |
| Significance | Pathogenic |
| Disease | Hypobetalipoproteinemia |
| Variation | info |
| Gene | DOCK7 ANGPTL3 |
| CLNDBN | Hypobetalipoproteinemia, familial, 2 |
| Reversed | 0 |
| HGVS | NC_000001.10:g.63063600_63063604delCTCAA |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000077769.2, |
