rs423904
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs423904(C;C) |
| Make rs423904(C;T) |
| Make rs423904(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 113129685 |
| Gene | IL1RN |
| is a | snp |
| is | mentioned by |
| dbSNP | rs423904 |
| dbSNP (classic) | rs423904 |
| ClinGen | rs423904 |
| ebi | rs423904 |
| HLI | rs423904 |
| Exac | rs423904 |
| Gnomad | rs423904 |
| Varsome | rs423904 |
| LitVar | rs423904 |
| Map | rs423904 |
| PheGenI | rs423904 |
| Biobank | rs423904 |
| 1000 genomes | rs423904 |
| hgdp | rs423904 |
| ensembl | rs423904 |
| geneview | rs423904 |
| scholar | rs423904 |
| rs423904 | |
| pharmgkb | rs423904 |
| gwascentral | rs423904 |
| openSNP | rs423904 |
| 23andMe | rs423904 |
| SNPshot | rs423904 |
| SNPdbe | rs423904 |
| MSV3d | rs423904 |
| GWAS Ctlg | rs423904 |
| GMAF | 0.1846 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| Rs423904 | |
|---|---|
| PubMed | [PMID 9771403 ]
|
| Affy Probeset | SNP_A-4245286 |
| Affy Orientation | same |
| On GW 5.0 | 1 |
| Alleles A/B | C/T |
| Ancestral | C |
| Population | Netherlands |
| Allele | T |
| Case Freq. | |
| Control Freq. | |
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 2.60 |
| Disease | Ulcerative colitis (UC) |
rs423904 increases susceptibility to Ulcerative colitis 2.60 times for carriers of the T allele [PMID 9771403]
[PMID 19043479] Association of -31T>C and -511 C>T polymorphisms in the interleukin 1 beta (IL1B) promoter in Korean keratoconus patients.
