rs439401
| Orientation | plus |
| Stabilized | plus |
| Make rs439401(C;C) |
| Make rs439401(C;T) |
| Make rs439401(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 19 |
| Position | 44911194 |
| Gene | APOE |
| is a | snp |
| is | mentioned by |
| dbSNP | rs439401 |
| dbSNP (classic) | rs439401 |
| ClinGen | rs439401 |
| ebi | rs439401 |
| HLI | rs439401 |
| Exac | rs439401 |
| Gnomad | rs439401 |
| Varsome | rs439401 |
| LitVar | rs439401 |
| Map | rs439401 |
| PheGenI | rs439401 |
| Biobank | rs439401 |
| 1000 genomes | rs439401 |
| hgdp | rs439401 |
| ensembl | rs439401 |
| geneview | rs439401 |
| scholar | rs439401 |
| rs439401 | |
| pharmgkb | rs439401 |
| gwascentral | rs439401 |
| openSNP | rs439401 |
| 23andMe | rs439401 |
| SNPshot | rs439401 |
| SNPdbe | rs439401 |
| MSV3d | rs439401 |
| GWAS Ctlg | rs439401 |
| GMAF | 0.3944 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
This appears to be the snp on the Illumina Human 550 which is closest to rs4420638
| GWAS snp | |
|---|---|
| PMID | [PMID 19060911 ]
|
| Trait | Triglycerides |
| Title | Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts |
| Risk Allele | G |
| P-val | 2E-9 |
| Odds Ratio | 0.09 [NR] SD increase |
| GWAS snp | |
|---|---|
| PMID | [PMID 21123754]
|
| Trait | |
| Title | Genome-wide association study of CSF biomarkers A{beta}1-42, t-tau, and p-tau181p in the ADNI cohort. |
| Risk Allele | |
| P-val | 0.000001 |
| Odds Ratio | None None |
| GWAS snp | |
|---|---|
| PMID | [PMID 21386085]
|
| Trait | |
| Title | A Bivariate Genome-Wide Approach to Metabolic Syndrome: STAMPEED Consortium |
| Risk Allele | C |
| P-val | 1E-8 |
| Odds Ratio | 0.2400 [0.16-0.32] unit increase |
[PMID 21149302] Effects of genetic variants on lipid parameters and dyslipidemia in a Chinese population
| GWAS snp | |
|---|---|
| PMID | [PMID 20686565]
|
| Trait | |
| Title | Biological, clinical and population relevance of 95 loci for blood lipids. |
| Risk Allele | T |
| P-val | 1E-30 |
| Odds Ratio | 5.5000 None |
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