rs4770403
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| Make rs4770403(A;A) |
| Make rs4770403(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 13 |
| Position | 23180988 |
| Gene | SGCG |
| is a | snp |
| is | mentioned by |
| dbSNP | rs4770403 |
| dbSNP (classic) | rs4770403 |
| ClinGen | rs4770403 |
| ebi | rs4770403 |
| HLI | rs4770403 |
| Exac | rs4770403 |
| Gnomad | rs4770403 |
| Varsome | rs4770403 |
| LitVar | rs4770403 |
| Map | rs4770403 |
| PheGenI | rs4770403 |
| Biobank | rs4770403 |
| 1000 genomes | rs4770403 |
| hgdp | rs4770403 |
| ensembl | rs4770403 |
| geneview | rs4770403 |
| scholar | rs4770403 |
| rs4770403 | |
| pharmgkb | rs4770403 |
| gwascentral | rs4770403 |
| openSNP | rs4770403 |
| 23andMe | rs4770403 |
| SNPshot | rs4770403 |
| SNPdbe | rs4770403 |
| MSV3d | rs4770403 |
| GWAS Ctlg | rs4770403 |
| GMAF | 0.1497 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 22004471 |
| Trait | |
| Title | Genome-wide significant association between alcohol dependence and a variant in the ADH gene cluster. |
| Risk Allele | |
| P-val | 0.000006 |
| Odds Ratio | 1.3300 None |
| ClinVar | |
|---|---|
| Risk | rs4770403(A;A) |
| Alt | rs4770403(A;A) |
| Reference | Rs4770403(G;G) |
| Significance | Probable-non-pathogenic |
| Disease | Limb-Girdle Muscular Dystrophy Severe autosomal recessive muscular dystrophy of childhood - North African type |
| Variation | info |
| Gene | SGCG |
| CLNDBN | Limb-Girdle Muscular Dystrophy, Recessive Severe autosomal recessive muscular dystrophy of childhood - North African type |
| Reversed | 0 |
| HGVS | NC_000013.10:g.23755127G>A |
| CLNSRC | |
| CLNACC | RCV000295084.1, RCV000336138.1, |
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 13
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip NatGeo2
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d
