rs587776398
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;T) | 6.7 | CDH1-based gastric cancer risk |
| (T;T) | 0 | common in clinvar |
| Make rs587776398(G;G) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 16 |
| Position | 68812149 |
| Gene | CDH1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs587776398 |
| dbSNP (classic) | rs587776398 |
| ClinGen | rs587776398 |
| ebi | rs587776398 |
| HLI | rs587776398 |
| Exac | rs587776398 |
| Gnomad | rs587776398 |
| Varsome | rs587776398 |
| LitVar | rs587776398 |
| Map | rs587776398 |
| PheGenI | rs587776398 |
| Biobank | rs587776398 |
| 1000 genomes | rs587776398 |
| hgdp | rs587776398 |
| ensembl | rs587776398 |
| geneview | rs587776398 |
| scholar | rs587776398 |
| rs587776398 | |
| pharmgkb | rs587776398 |
| gwascentral | rs587776398 |
| openSNP | rs587776398 |
| 23andMe | rs587776398 |
| SNPshot | rs587776398 |
| SNPdbe | rs587776398 |
| MSV3d | rs587776398 |
| GWAS Ctlg | rs587776398 |
| Max Magnitude | 6.7 |
Also known as c.1023T>G, p.Tyr341Ter or Y341X, the minor allele is considered a pathogenic rare mutation for hereditary diffuse gastric cancer in ClinVar.
| ClinVar | |
|---|---|
| Risk | rs587776398(C;C) rs587776398(G;G) |
| Alt | rs587776398(C;C) rs587776398(G;G) |
| Reference | Rs587776398(T;T) |
| Significance | Pathogenic |
| Disease | Hereditary diffuse gastric cancer |
| Variation | info |
| Gene | CDH1 |
| CLNDBN | Hereditary diffuse gastric cancer |
| Reversed | 0 |
| HGVS | NC_000016.9:g.68846052T>C; NC_000016.9:g.68846052T>G |
| CLNSRC | ClinVar |
| CLNACC | RCV000229435.3, RCV000144456.1, |
