rs587780113

Orientation

plus

Stabilized

plus

Geno	Mag	Summary
(A;G)	6.7	CDH1-based gastric cancer risk
(C;G)	6.7	CDH1-based gastric cancer risk
(G;G)	0	common in clinvar
(G;T)	6.7	CDH1-based gastric cancer risk

Make rs587780113(A;A)

Reference

GRCh38.p2 38.2/144

Chromosome

16

Position

68815760

Gene

CDH1

is a	snp
is	mentioned by
dbSNP	rs587780113
dbSNP (classic)	rs587780113
ClinGen	rs587780113
ebi	rs587780113
HLI	rs587780113
Exac	rs587780113
Gnomad	rs587780113
Varsome	rs587780113
LitVar	rs587780113
Map	rs587780113
PheGenI	rs587780113
Biobank	rs587780113
1000 genomes	rs587780113
hgdp	rs587780113
ensembl	rs587780113
geneview	rs587780113
scholar	rs587780113
google	rs587780113
pharmgkb	rs587780113
gwascentral	rs587780113
openSNP	rs587780113
23andMe	rs587780113
SNPshot	rs587780113
SNPdbe	rs587780113
MSV3d	rs587780113
GWAS Ctlg	rs587780113

Max Magnitude

6.7

Also known as c.1565+1G>A, the minor allele is considered a pathogenic rare mutation for hereditary diffuse gastric cancer in ClinVar.

ClinVar
Risk	rs587780113(A;A) rs587780113(C;C) rs587780113(T;T)
Alt	rs587780113(A;A) rs587780113(C;C) rs587780113(T;T)
Reference	Rs587780113(G;G)
Significance	Pathogenic
Disease	Hereditary cancer-predisposing syndrome Hereditary diffuse gastric cancer not provided
Variation	info
Gene	CDH1
CLNDBN	Hereditary cancer-predisposing syndrome Hereditary diffuse gastric cancer not provided
Reversed	0
HGVS	NC_000016.9:g.68849663G>A; NC_000016.9:g.68849663G>C; NC_000016.9:g.68849663G>T
CLNSRC
CLNACC	RCV000115843.5, RCV000123238.2, RCV000212372.2, RCV000465857.1, RCV000129610.2,