rs587781276
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (-;TG) | 6.7 | CDH1-based gastric cancer risk |
| (TG;TG) | 0 | common in clinvar |
| Make rs587781276(-;-) |
| Reference | GRCh38.p2 38.2/144 |
| Chromosome | 16 |
| Position | 68823526 |
| Gene | CDH1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs587781276 |
| dbSNP (classic) | rs587781276 |
| ClinGen | rs587781276 |
| ebi | rs587781276 |
| HLI | rs587781276 |
| Exac | rs587781276 |
| Gnomad | rs587781276 |
| Varsome | rs587781276 |
| LitVar | rs587781276 |
| Map | rs587781276 |
| PheGenI | rs587781276 |
| Biobank | rs587781276 |
| 1000 genomes | rs587781276 |
| hgdp | rs587781276 |
| ensembl | rs587781276 |
| geneview | rs587781276 |
| scholar | rs587781276 |
| rs587781276 | |
| pharmgkb | rs587781276 |
| gwascentral | rs587781276 |
| openSNP | rs587781276 |
| 23andMe | rs587781276 |
| SNPshot | rs587781276 |
| SNPdbe | rs587781276 |
| MSV3d | rs587781276 |
| GWAS Ctlg | rs587781276 |
| Merged from | Rs786204165 |
| Max Magnitude | 6.7 |
Also known as c.2064_2065delTG, the minor allele is considered a pathogenic rare mutation for hereditary diffuse gastric cancer in ClinVar.
| ClinVar | |
|---|---|
| Risk | rs587781276(-;-) |
| Alt | rs587781276(-;-) |
| Reference | Rs587781276(TG;TG) |
| Significance | Pathogenic |
| Disease | Hereditary cancer-predisposing syndrome Hereditary diffuse gastric cancer |
| Variation | info |
| Gene | CDH1 |
| CLNDBN | Hereditary cancer-predisposing syndrome Hereditary diffuse gastric cancer |
| Reversed | 0 |
| HGVS | NC_000016.9:g.68857429_68857430delTG |
| CLNSRC | |
| CLNACC | RCV000128928.2, RCV000168178.1, |
