rs6166
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common/normal |
(A;G) | normal risk | |
(C;T) | 0 | |
(G;G) | 1 | Females slightly more likely to be sterile |
(T;T) | 0 |
Reference | GRCh38 38.1/141 |
Chromosome | 2 |
Position | 48962782 |
Gene | FSHR |
is a | snp |
is | mentioned by |
dbSNP | rs6166 |
dbSNP (classic) | rs6166 |
ClinGen | rs6166 |
ebi | rs6166 |
HLI | rs6166 |
Exac | rs6166 |
Gnomad | rs6166 |
Varsome | rs6166 |
LitVar | rs6166 |
Map | rs6166 |
PheGenI | rs6166 |
Biobank | rs6166 |
1000 genomes | rs6166 |
hgdp | rs6166 |
ensembl | rs6166 |
geneview | rs6166 |
scholar | rs6166 |
rs6166 | |
pharmgkb | rs6166 |
gwascentral | rs6166 |
openSNP | rs6166 |
23andMe | rs6166 |
SNPshot | rs6166 |
SNPdbe | rs6166 |
MSV3d | rs6166 |
GWAS Ctlg | rs6166 |
GMAF | 0.4017 |
Max Magnitude | 1 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
rs6166, also known as Asn680Ser or c.2039G>A, is a SNP in the follicle stimulating hormone receptor FSHR gene. rs6166(G) is the risk allele encoding the Ser amino acid, at least based on one study in which less fecund women were found to be disproportionately Ser/Ser homozygotes (i.e. rs6166(G;G) homozygotes; p=0.0035).[PMID 18159088]
[PMID 20335500] FSHR gene polymorphisms influence bone mineral density and bone turnover in postmenopausal women
[PMID 20448000] Commentary: FSH and Bone 2010: Evolving Evidence
[PMID 21546300] Influence of follicle-stimulating hormone receptor (FSHR) Ser680Asn polymorphism on ovarian function and in-vitro fertilization outcome: A meta-analysis
[PMID 22791757] Combined Effects of the Variants FSHB -211G/T and FSHR 2039A>G on Male Reproductive Parameters
ClinVar | |
---|---|
Risk | Rs6166(A;A) |
Alt | Rs6166(A;A) |
Reference | Rs6166(G;G) |
Significance | Other |
Disease | Ovarian response to FSH stimulation Ovarian hyperstimulation syndrome not specified Ovarian Dysgenesis |
Variation | info |
Gene | FSHR |
CLNDBN | Ovarian response to FSH stimulation Ovarian hyperstimulation syndrome not specified Ovarian Dysgenesis |
Reversed | 1 |
HGVS | NC_000002.11:g.49189921C>T |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000017634.4, RCV000017635.6, RCV000252781.1, RCV000316299.1, |
[PMID 18603647] Functional genetic polymorphisms and female reproductive disorders: Part I: Polycystic ovary syndrome and ovarian response.
[PMID 19147210] The haplotype of two FSHR polymorphisms in ovarian cancer--a potential role of ethnology in risk modification.
[PMID 19387820] Genetic polymorphisms of FSHR, CYP17, CYP1A1, CAPN10, INSR, SERPINE1 genes in adolescent girls with polycystic ovary syndrome.
[PMID 19403562] Genetic polymorphisms of GnRH and gonadotrophic hormone receptors affect the phenotype of polycystic ovary syndrome.
[PMID 20399696] Two FSHR variants, haplotypes and meta-analysis in Chinese women with premature ovarian failure and polycystic ovary syndrome.
[PMID 21269619] Epistasis between FSHR and CYP19A1 polymorphisms is associated with premature ovarian failure.
[PMID 22401810] Assessment of FSHR variants and antimullerian hormone in infertility patients with a reduced ovarian response to gonadotropin stimulation.
[PMID 23413141] Study in 1790 Baltic men: FSHR Asn680Ser polymorphism affects total testes volume
[PMID 22414334] Follicle stimulating hormone receptor G-29A, 919A>G, 2039A>G polymorphism and the risk of male infertility: a meta-analysis.
[PMID 23394253] Association of rs6166 polymorphism with FSH receptor transcript variants and steroid production in human granulosa cell cultures.
[PMID 25052309] The FSHB -211G>T variant attenuates serum FSH levels in the supraphysiological gonadotropin setting of Klinefelter syndrome
[PMID 25721191] Follicle-stimulating hormone receptor polymorphism affects the outcome of ovulation induction in normogonadotropic (World Health Organization class 2) anovulatory subfertility
[PMID 25241129] Genotyping common FSHR polymorphisms based on competitive amplification of differentially melting amplicons (CADMA)
[PMID 28547204] FSH receptor gene p. Thr307Ala and p. Asn680Ser polymorphisms are associated with the risk of polycystic ovary syndrome.
[PMID 28764642] The susceptibility of FSHB -211G > T and FSHR G-29A, 919A > G, 2039A > G polymorphisms to men infertility: an association study and meta-analysis.
[PMID 30843750] Genetic variants linked to folliculogenesis and successful pregnancy are not associated with twin births in a twins' town.
- Is a snp
- In dbSNP
- SNPs on chromosome 2
- Has genotype
- Has population
- Uses omim
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip 23andMe v5
- On chip Affy GenomeWide 6
- On chip Ancestry v2c
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip Ancestry v2d