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rs6196

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;A) 0 common in complete genomics
Make rs6196(A;G)
Make rs6196(G;G)
ReferenceGRCh38 38.1/141
Chromosome5
Position143281925
GeneNR3C1
is asnp
is mentioned by
dbSNPrs6196
dbSNP (classic)rs6196
ClinGenrs6196
ebirs6196
HLIrs6196
Exacrs6196
Gnomadrs6196
Varsomers6196
LitVarrs6196
Maprs6196
PheGenIrs6196
Biobankrs6196
1000 genomesrs6196
hgdprs6196
ensemblrs6196
geneviewrs6196
scholarrs6196
googlers6196
pharmgkbrs6196
gwascentralrs6196
openSNPrs6196
23andMers6196
SNPshotrs6196
SNPdbers6196
MSV3drs6196
GWAS Ctlgrs6196
GMAF0.1382
Max Magnitude0
? (A;A) (A;G) (G;G) 28


[PMID 20472303] Associations between common arginine vasopressin 1b receptor and glucocorticoid receptor gene variants and HPA axis responses to psychosocial stress in a child psychiatric population


[PMID 21050724] Clock genes and body composition in patients with schizophrenia under treatment with antipsychotic drugs


[PMID 21633323] Variation in the glucocorticoid receptor gene (NR3C1) may be associated with corticosteroid dependency and resistance in children with Crohn's disease

[PMID 18698231OA-icon.png] Polymorphisms affecting gene transcription and mRNA processing in pharmacogenetic candidate genes: detection through allelic expression imbalance in human target tissues.

[PMID 18854398OA-icon.png] Glucocorticoid receptor gene variant in the 3' untranslated region is associated with multiple measures of blood pressure.

[PMID 19359258OA-icon.png] Cohort profile: risk patterns and processes for psychopathology emerging during adolescence: the ROOTS project.

[PMID 19772600OA-icon.png] A comparison of classification methods for predicting Chronic Fatigue Syndrome based on genetic data.

[PMID 20712049OA-icon.png] Glucocorticoid receptor gene haplotype structure and steroid therapy outcome in IBD patients.

[PMID 21112363] Association of FKBP5 gene haplotypes with completed suicide in the Japanese population.

[PMID 21876507] Glucocorticoid receptor polymorphism is associated with lithium response in bipolar patients.


ClinVar
Risk rs6196(G;G)
Alt rs6196(G;G)
Reference Rs6196(A;A)
Significance Probable-non-pathogenic
Disease Glucocorticoid resistance
Variation info
Gene NR3C1
CLNDBN Glucocorticoid resistance
Reversed 0
HGVS NC_000005.9:g.142661490A>G
CLNSRC
CLNACC RCV000341438.1,



[PMID 29207898] NR3C1 gene polymorphisms are associated with steroid resistance in patients with primary nephrotic syndrome.


[PMID 29587872OA-icon.png] Sequencing the exons of human glucocorticoid receptor (NR3C1) gene in Han Chinese with high-altitude pulmonary edema.