rs6354
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| Make rs6354(A;A) |
| Make rs6354(A;C) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 17 |
| Position | 30222880 |
| Gene | SLC6A4 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6354 |
| dbSNP (classic) | rs6354 |
| ClinGen | rs6354 |
| ebi | rs6354 |
| HLI | rs6354 |
| Exac | rs6354 |
| Gnomad | rs6354 |
| Varsome | rs6354 |
| LitVar | rs6354 |
| Map | rs6354 |
| PheGenI | rs6354 |
| Biobank | rs6354 |
| 1000 genomes | rs6354 |
| hgdp | rs6354 |
| ensembl | rs6354 |
| geneview | rs6354 |
| scholar | rs6354 |
| rs6354 | |
| pharmgkb | rs6354 |
| gwascentral | rs6354 |
| openSNP | rs6354 |
| 23andMe | rs6354 |
| SNPshot | rs6354 |
| SNPdbe | rs6354 |
| MSV3d | rs6354 |
| GWAS Ctlg | rs6354 |
| GMAF | 0.213 |
| Max Magnitude | 0 |
| ? | (A;A) (A;C) (C;C) | 28 |
|---|---|---|
|
| ||
[PMID 20031642
] Serotonin Transporter Gene, Depressive Symptoms, and Interleukin-6
[PMID 15361494] Association between a functional polymorphism in the serotonin transporter gene and diarrhoea predominant irritable bowel syndrome in women.
[PMID 15995945] Allelic heterogeneity at the serotonin transporter locus (SLC6A4) confers susceptibility to autism and rigid-compulsive behaviors.
[PMID 17629953] Loudness dependence of auditory evoked potentials is not associated with polymorphisms or haplotypes in the serotonin transporter gene in a community-based sample of German healthy volunteers.
[PMID 19020798] Association study to evaluate the serotonin transporter and apolipoprotein E genes in frontotemporal lobar degeneration in Italy.
[PMID 19032574] Characterization of a functional polymorphism in the 3' UTR of SLC6A4 and its association with drinking intensity.
[PMID 19141529] Serotonin transporter polymorphisms in patients with portopulmonary hypertension.
[PMID 19199283] Variants of the serotonin transporter gene and NEO-PI-R Neuroticism: No association in the BLSA and SardiNIA samples.
[PMID 19541292] Accurate, Large-Scale Genotyping of 5HTTLPR and Flanking Single Nucleotide Polymorphisms in an Association Study of Depression, Anxiety, and Personality Measures.
[PMID 20395645] Association study of serotonin transporter gene (SLC6A4) in systemic sclerosis in European Caucasian populations.
[PMID 23149035] Association study of serotonin transporter availability and SLC6A4 gene polymorphisms in patients with major depression.
| ClinVar | |
|---|---|
| Risk | rs6354(A;A) |
| Alt | rs6354(A;A) |
| Reference | Rs6354(C;C) |
| Significance | Probable-non-pathogenic |
| Disease | Behavior disorder |
| Variation | info |
| Gene | SLC6A4 |
| CLNDBN | Behavior disorder |
| Reversed | 1 |
| HGVS | NC_000017.10:g.28549898G>T |
| CLNSRC | |
| CLNACC | RCV000262129.1, |
