rs6413453
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| Make rs6413453(C;T) |
| Make rs6413453(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 161222526 |
| Gene | APOA2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6413453 |
| dbSNP (classic) | rs6413453 |
| ClinGen | rs6413453 |
| ebi | rs6413453 |
| HLI | rs6413453 |
| Exac | rs6413453 |
| Gnomad | rs6413453 |
| Varsome | rs6413453 |
| LitVar | rs6413453 |
| Map | rs6413453 |
| PheGenI | rs6413453 |
| Biobank | rs6413453 |
| 1000 genomes | rs6413453 |
| hgdp | rs6413453 |
| ensembl | rs6413453 |
| geneview | rs6413453 |
| scholar | rs6413453 |
| rs6413453 | |
| pharmgkb | rs6413453 |
| gwascentral | rs6413453 |
| openSNP | rs6413453 |
| 23andMe | rs6413453 |
| SNPshot | rs6413453 |
| SNPdbe | rs6413453 |
| MSV3d | rs6413453 |
| GWAS Ctlg | rs6413453 |
| GMAF | 0.1074 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
A meta-analysis of several APOA2 SNPs (including this one) found no association between any APOA2 SNPs studied and type-2 diabetes.[PMID 19216768
]
[PMID 18269685] Type 2 diabetes susceptibility genes on chromosome 1q21-24.
[PMID 26590203] Identification of Sequence Variation in the Apolipoprotein A2 Gene and Their Relationship with Serum High-Density Lipoprotein Cholesterol Levels
| ClinVar | |
|---|---|
| Risk | rs6413453(T;T) |
| Alt | rs6413453(T;T) |
| Reference | Rs6413453(C;C) |
| Significance | Probable-non-pathogenic |
| Disease | Apolipoprotein A-II deficiency |
| Variation | info |
| Gene | APOA2 |
| CLNDBN | Apolipoprotein A-II deficiency |
| Reversed | 1 |
| HGVS | NC_000001.10:g.161192316G>A |
| CLNSRC | |
| CLNACC | RCV000380848.1, |
