rs6506569
From SNPedia
Orientation | plus |
Stabilized | plus |
Make rs6506569(C;C) |
Make rs6506569(C;T) |
Make rs6506569(T;T) |
Reference | GRCh38 38.1/142 |
Chromosome | 18 |
Position | 8275859 |
Gene | PTPRM |
is a | snp |
is | mentioned by |
dbSNP | rs6506569 |
dbSNP (classic) | rs6506569 |
ClinGen | rs6506569 |
ebi | rs6506569 |
HLI | rs6506569 |
Exac | rs6506569 |
Gnomad | rs6506569 |
Varsome | rs6506569 |
LitVar | rs6506569 |
Map | rs6506569 |
PheGenI | rs6506569 |
Biobank | rs6506569 |
1000 genomes | rs6506569 |
hgdp | rs6506569 |
ensembl | rs6506569 |
geneview | rs6506569 |
scholar | rs6506569 |
rs6506569 | |
pharmgkb | rs6506569 |
gwascentral | rs6506569 |
openSNP | rs6506569 |
23andMe | rs6506569 |
SNPshot | rs6506569 |
SNPdbe | rs6506569 |
MSV3d | rs6506569 |
GWAS Ctlg | rs6506569 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 24583629] |
Trait | Response to methotrexate in rheumatoid arthritis |
Title | Genome-wide analysis of methotrexate pharmacogenomics in rheumatoid arthritis shows multiple novel risk variants and leads for TYMS regulation. |
Risk Allele | G |
P-val | 7E-6 |
Odds Ratio | 1.98 [1.46-2.67] |