rs6896702
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 1 | Normal risk of developing Parkinson's Disease |
| (C;T) | 1.5 | Slightly increased risk of developing Parkinson's Disease |
| (T;T) | 2 | Increased risk of developing Parkinson's Disease |
| Reference | GRCh38 38.1/141 |
| Chromosome | 5 |
| Position | 9331736 |
| Gene | SEMA5A |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6896702 |
| dbSNP (classic) | rs6896702 |
| ClinGen | rs6896702 |
| ebi | rs6896702 |
| HLI | rs6896702 |
| Exac | rs6896702 |
| Gnomad | rs6896702 |
| Varsome | rs6896702 |
| LitVar | rs6896702 |
| Map | rs6896702 |
| PheGenI | rs6896702 |
| Biobank | rs6896702 |
| 1000 genomes | rs6896702 |
| hgdp | rs6896702 |
| ensembl | rs6896702 |
| geneview | rs6896702 |
| scholar | rs6896702 |
| rs6896702 | |
| pharmgkb | rs6896702 |
| gwascentral | rs6896702 |
| openSNP | rs6896702 |
| 23andMe | rs6896702 |
| SNPshot | rs6896702 |
| SNPdbe | rs6896702 |
| MSV3d | rs6896702 |
| GWAS Ctlg | rs6896702 |
| GMAF | 0.3219 |
| Max Magnitude | 2 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| Rs6896702 | |
|---|---|
| PubMed | [PMID 16252231 ]
|
| Affy Probeset | SNP_A-8488227 |
| Affy Orientation | reverse |
| On GW 5.0 | |
| Alleles A/B | A/G |
| Ancestral | C |
| Population | |
| Allele | T |
| Case Freq. | |
| Control Freq. | |
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 1.74 |
| Disease | Parkinson's disease (PKD) |
rs6896702 is in linkage disequilibrium with a polymorphism that increases susceptibility to Parkinson's disease 1.74 times for carriers of the T allele [PMID 16252231]
