rs6988229
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| Make rs6988229(C;T) |
| Make rs6988229(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 8 |
| Position | 138872266 |
| Gene | COL22A1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6988229 |
| dbSNP (classic) | rs6988229 |
| ClinGen | rs6988229 |
| ebi | rs6988229 |
| HLI | rs6988229 |
| Exac | rs6988229 |
| Gnomad | rs6988229 |
| Varsome | rs6988229 |
| LitVar | rs6988229 |
| Map | rs6988229 |
| PheGenI | rs6988229 |
| Biobank | rs6988229 |
| 1000 genomes | rs6988229 |
| hgdp | rs6988229 |
| ensembl | rs6988229 |
| geneview | rs6988229 |
| scholar | rs6988229 |
| rs6988229 | |
| pharmgkb | rs6988229 |
| gwascentral | rs6988229 |
| openSNP | rs6988229 |
| 23andMe | rs6988229 |
| SNPshot | rs6988229 |
| SNPdbe | rs6988229 |
| MSV3d | rs6988229 |
| GWAS Ctlg | rs6988229 |
| GMAF | 0.2328 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23508266 |
| Trait | Asthma (bronchodilator response) |
| Title | A genome-wide association study of bronchodilator response in asthmatics. |
| Risk Allele | T |
| P-val | 9E-6 |
| Odds Ratio | NR NR |
| ClinVar | |
|---|---|
| Risk | rs6988229(T;T) |
| Alt | rs6988229(T;T) |
| Reference | Rs6988229(C;C) |
| Significance | Drug-response |
| Disease | salbutamol response - Efficacy |
| Variation | info |
| Gene | COL22A1 |
| CLNDBN | salbutamol response - Efficacy |
| Reversed | 0 |
| HGVS | NC_000008.10:g.139884509C>T |
| CLNSRC | PharmGKB Clinical Annotation |
| CLNACC | RCV000211131.1, |
