rs730881972
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;G) | 5.8 | Likely miscall in 23andMe v4 (or older) and Ancestry v2c/v2d data; otherwise, STK11 gene mutation associated with Peutz-Jeghers syndrome |
| (G;G) | 0 | common in clinvar |
| Make rs730881972(C;C) |
| Reference | GRCh38.p2 38.2/144 |
| Chromosome | 19 |
| Position | 1220395 |
| Gene | STK11 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs730881972 |
| dbSNP (classic) | rs730881972 |
| ClinGen | rs730881972 |
| ebi | rs730881972 |
| HLI | rs730881972 |
| Exac | rs730881972 |
| Gnomad | rs730881972 |
| Varsome | rs730881972 |
| LitVar | rs730881972 |
| Map | rs730881972 |
| PheGenI | rs730881972 |
| Biobank | rs730881972 |
| 1000 genomes | rs730881972 |
| hgdp | rs730881972 |
| ensembl | rs730881972 |
| geneview | rs730881972 |
| scholar | rs730881972 |
| rs730881972 | |
| pharmgkb | rs730881972 |
| gwascentral | rs730881972 |
| openSNP | rs730881972 |
| 23andMe | rs730881972 |
| SNPshot | rs730881972 |
| SNPdbe | rs730881972 |
| MSV3d | rs730881972 |
| GWAS Ctlg | rs730881972 |
| Max Magnitude | 5.8 |
c.487G>C (p.Gly163Arg)
23andMe name: i6018852
| ClinVar | |
|---|---|
| Risk | rs730881972(C;C) rs730881972(T;T) |
| Alt | rs730881972(C;C) rs730881972(T;T) |
| Reference | Rs730881972(G;G) |
| Significance | Probable-Pathogenic |
| Disease | Hereditary cancer-predisposing syndrome Squamous cell carcinoma of lung |
| Variation | info |
| Gene | STK11 |
| CLNDBN | Hereditary cancer-predisposing syndrome Squamous cell carcinoma of lung |
| Reversed | 0 |
| HGVS | NC_000019.9:g.1220394G>C; NC_000019.9:g.1220394G>T |
| CLNSRC | |
| CLNACC | RCV000492450.1, RCV000431280.1, |
