rs7720838

Orientation

plus

Stabilized

plus

Make rs7720838(G;G)

Make rs7720838(G;T)

Make rs7720838(T;T)

Reference

GRCh38 38.1/141

Chromosome

5

Position

40486794

is a	snp
is	mentioned by
dbSNP	rs7720838
dbSNP (classic)	rs7720838
ClinGen	rs7720838
ebi	rs7720838
HLI	rs7720838
Exac	rs7720838
Gnomad	rs7720838
Varsome	rs7720838
LitVar	rs7720838
Map	rs7720838
PheGenI	rs7720838
Biobank	rs7720838
1000 genomes	rs7720838
hgdp	rs7720838
ensembl	rs7720838
geneview	rs7720838
scholar	rs7720838
google	rs7720838
pharmgkb	rs7720838
gwascentral	rs7720838
openSNP	rs7720838
23andMe	rs7720838
SNPshot	rs7720838
SNPdbe	rs7720838
MSV3d	rs7720838
GWAS Ctlg	rs7720838

GMAF

0.4206

Max Magnitude

0

?	(G;G) (G;T) (T;T)	28

[PMID 23300802] PTGER4 expression-modulating polymorphisms in the 5p13.1 region predispose to Crohn's disease and affect NF-κB and XBP1 binding sites

GWAS snp
PMID	[PMID 23817569]
Trait	Self-reported allergy
Title	A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci.
Risk Allele	G
P-val	8E-11
Odds Ratio	.08 [0.055-0.102] unit decrease

[PMID 17447842] Novel Crohn disease locus identified by genome-wide association maps to a gene desert on 5p13.1 and modulates expression of PTGER4.