rs780093
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs780093(A;A) |
| Make rs780093(A;G) |
| Make rs780093(G;G) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 2 |
| Position | 27519736 |
| Gene | GCKR |
| is a | snp |
| is | mentioned by |
| dbSNP | rs780093 |
| dbSNP (classic) | rs780093 |
| ClinGen | rs780093 |
| ebi | rs780093 |
| HLI | rs780093 |
| Exac | rs780093 |
| Gnomad | rs780093 |
| Varsome | rs780093 |
| LitVar | rs780093 |
| Map | rs780093 |
| PheGenI | rs780093 |
| Biobank | rs780093 |
| 1000 genomes | rs780093 |
| hgdp | rs780093 |
| ensembl | rs780093 |
| geneview | rs780093 |
| scholar | rs780093 |
| rs780093 | |
| pharmgkb | rs780093 |
| gwascentral | rs780093 |
| openSNP | rs780093 |
| 23andMe | rs780093 |
| SNPshot | rs780093 |
| SNPdbe | rs780093 |
| MSV3d | rs780093 |
| GWAS Ctlg | rs780093 |
| GMAF | 0.3811 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20705733 ]
|
| Trait | |
| Title | Common Variants in the Calcium Sensing Receptor Gene are Associated with Total Serum Calcium Levels |
| Risk Allele | T |
| P-val | 0.000007 |
| Odds Ratio | 0.02 [NR] unit increase |
| GWAS snp | |
|---|---|
| PMID | [PMID 20884846]
|
| Trait | |
| Title | Multiple Genetic Loci Influence Serum Urate And Their Relationship With Gout and Cardiovascular Disease Risk Factors |
| Risk Allele | T |
| P-val | 4E-17 |
| Odds Ratio | 5.15 [3.95-6.35] umol/l increase |
| GWAS snp | |
|---|---|
| PMID | [PMID 21102463]
|
| Trait | |
| Title | Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci |
| Risk Allele | T |
| P-val | 5E-11 |
| Odds Ratio | 1.1500 [1.10-1.21] |
| GWAS snp | |
|---|---|
| PMID | [PMID 21386085]
|
| Trait | |
| Title | A Bivariate Genome-Wide Approach to Metabolic Syndrome: STAMPEED Consortium |
| Risk Allele | A |
| P-val | 3E-10 |
| Odds Ratio | 0.1800 [0.12-0.24] unit increase |
[PMID 19503597] Meta-analysis of 28,141 individuals identifies common variants within five new loci that influence uric acid concentrations.
[PMID 20570916] Fine-mapping in African Americans of 8 recently discovered genetic loci for plasma lipids: the Jackson Heart Study.
[PMID 22395765] Association between gout and polymorphisms in GCKR in male Han Chinese.
| GWAS snp | |
|---|---|
| PMID | [PMID 22829776]
|
| Trait | Sex hormone-binding globulin levels |
| Title | A genome-wide association meta-analysis of circulating sex hormone-binding globulin reveals multiple Loci implicated in sex steroid hormone regulation. |
| Risk Allele | T |
| P-val | 2E-16 |
| Odds Ratio | .03 [0.024-0.040] nmol/L decrease |
| GWAS snp | |
|---|---|
| PMID | [PMID 22747683]
|
| Trait | Breast size |
| Title | Genetic variants associated with breast size also influence breast cancer risk. |
| Risk Allele | T |
| P-val | 5E-6 |
| Odds Ratio | .07 [0.041-0.103] cup size increase |
| GWAS snp | |
|---|---|
| PMID | [PMID 23362303]
|
| Trait | Palmitic acid (16:0) plasma levels |
| Title | Genome-wide association study identifies novel loci associated with concentrations of four plasma phospholipid fatty acids in the de novo lipogenesis pathway: results from the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) consortium. |
| Risk Allele | T |
| P-val | 3E-6 |
| Odds Ratio | .13 unit increase |
[PMID 24385677] Positive Association between GCKR rs780093 Polymorphism and Coronary Heart Disease in the Aged Han Chinese
