rs786202033
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (-;C) | 6.7 | CDH1-based gastric cancer risk |
| (C;C) | 0 | common in clinvar |
| Make rs786202033(-;-) |
| Reference | GRCh38.p2 38.2/146 |
| Chromosome | 16 |
| Position | 68823461 |
| Gene | CDH1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs786202033 |
| dbSNP (classic) | rs786202033 |
| ClinGen | rs786202033 |
| ebi | rs786202033 |
| HLI | rs786202033 |
| Exac | rs786202033 |
| Gnomad | rs786202033 |
| Varsome | rs786202033 |
| LitVar | rs786202033 |
| Map | rs786202033 |
| PheGenI | rs786202033 |
| Biobank | rs786202033 |
| 1000 genomes | rs786202033 |
| hgdp | rs786202033 |
| ensembl | rs786202033 |
| geneview | rs786202033 |
| scholar | rs786202033 |
| rs786202033 | |
| pharmgkb | rs786202033 |
| gwascentral | rs786202033 |
| openSNP | rs786202033 |
| 23andMe | rs786202033 |
| SNPshot | rs786202033 |
| SNPdbe | rs786202033 |
| MSV3d | rs786202033 |
| GWAS Ctlg | rs786202033 |
| Max Magnitude | 6.7 |
Also known as c.1999delC, the minor allele is considered a pathogenic rare mutation for hereditary diffuse gastric cancer in ClinVar.
| ClinVar | |
|---|---|
| Risk | rs786202033(-;-) |
| Alt | rs786202033(-;-) |
| Reference | Rs786202033(C;C) |
| Significance | Pathogenic |
| Disease | Hereditary cancer-predisposing syndrome not provided |
| Variation | info |
| Gene | CDH1 |
| CLNDBN | Hereditary cancer-predisposing syndrome not provided |
| Reversed | 0 |
| HGVS | NC_000016.9:g.68857364delC |
| CLNSRC | |
| CLNACC | RCV000164640.1, RCV000376724.1, |
