rs80338848
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 5 | Pendred Syndrome |
(C;T) | 4 | Pendred syndrome carrier |
(T;T) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 7 |
Position | 107675051 |
Gene | SLC26A4 |
is a | snp |
is | mentioned by |
dbSNP | rs80338848 |
dbSNP (classic) | rs80338848 |
ClinGen | rs80338848 |
ebi | rs80338848 |
HLI | rs80338848 |
Exac | rs80338848 |
Gnomad | rs80338848 |
Varsome | rs80338848 |
LitVar | rs80338848 |
Map | rs80338848 |
PheGenI | rs80338848 |
Biobank | rs80338848 |
1000 genomes | rs80338848 |
hgdp | rs80338848 |
ensembl | rs80338848 |
geneview | rs80338848 |
scholar | rs80338848 |
rs80338848 | |
pharmgkb | rs80338848 |
gwascentral | rs80338848 |
openSNP | rs80338848 |
23andMe | rs80338848 |
SNPshot | rs80338848 |
SNPdbe | rs80338848 |
MSV3d | rs80338848 |
GWAS Ctlg | rs80338848 |
Max Magnitude | 5 |
rs80338848, also known as L236P, is a SNP in the SLC26A4 gene associated with the hearing loss condition known as Pendred Syndrome.
ClinVar | |
---|---|
Risk | Rs80338848(C;C) |
Alt | Rs80338848(C;C) |
Reference | Rs80338848(T;T) |
Significance | Pathogenic |
Disease | Pendred's syndrome Enlarged vestibular aqueduct syndrome |
Variation | info |
Gene | SLC26A4 |
CLNDBN | Pendred's syndrome Enlarged vestibular aqueduct syndrome |
Reversed | 0 |
HGVS | NC_000007.13:g.107315496T>C |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000005086.5, RCV000036505.2, RCV000269713.1, |
[PMID 9618166] Two frequent missense mutations in Pendred syndrome.
[PMID 9618167] Molecular analysis of the PDS gene in Pendred syndrome.
[PMID 11317356] Pendred syndrome, DFNB4, and PDS/SLC26A4 identification of eight novel mutations and possible genotype-phenotype correlations.
[PMID 18310264] Heterogeneity in the processing defect of SLC26A4 mutants.
[PMID 10700480] Enlarged vestibular aqueduct: a radiological marker of pendred syndrome, and mutation of the PDS gene.
[PMID 15689455] SLC26A4/PDS genotype-phenotype correlation in hearing loss with enlargement of the vestibular aqueduct (EVA): evidence that Pendred syndrome and non-syndromic EVA are distinct clinical and genetic entities.