rs8050910
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs8050910(G;G) |
| Make rs8050910(G;T) |
| Make rs8050910(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 85105567 |
| Gene | FAM92B |
| is a | snp |
| is | mentioned by |
| dbSNP | rs8050910 |
| dbSNP (classic) | rs8050910 |
| ClinGen | rs8050910 |
| ebi | rs8050910 |
| HLI | rs8050910 |
| Exac | rs8050910 |
| Gnomad | rs8050910 |
| Varsome | rs8050910 |
| LitVar | rs8050910 |
| Map | rs8050910 |
| PheGenI | rs8050910 |
| Biobank | rs8050910 |
| 1000 genomes | rs8050910 |
| hgdp | rs8050910 |
| ensembl | rs8050910 |
| geneview | rs8050910 |
| scholar | rs8050910 |
| rs8050910 | |
| pharmgkb | rs8050910 |
| gwascentral | rs8050910 |
| openSNP | rs8050910 |
| 23andMe | rs8050910 |
| SNPshot | rs8050910 |
| SNPdbe | rs8050910 |
| MSV3d | rs8050910 |
| GWAS Ctlg | rs8050910 |
| GMAF | 0.4348 |
| Max Magnitude | 0 |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
| Rs8050910 | |
|---|---|
| PubMed | [PMID 17435756 |
| Affy Probeset | SNP_A-2197527 |
| Affy Orientation | reverse |
| On GW 5.0 | 1 |
| Alleles A/B | A/C |
| Ancestral | T |
| Population | EU |
| Allele | T |
| Case Freq. | 0.61 |
| Control Freq. | 0.54 |
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 1.19 |
| Disease | Crohn's disease (CD) |
rs8050910 increases susceptibility to Crohn's disease 1.19 times for carriers of the T allele [PMID 17435756
]
[PMID 19262523] rs224136 on chromosome 10q21.1 and variants in PHOX2B, NCF4, and FAM92B are not major genetic risk factors for susceptibility to Crohn's disease in the German population
[PMID 17068223
] A genome-wide association study identifies IL23R as an inflammatory bowel disease gene.
[PMID 18580884] Confirmation of association of IRGM and NCF4 with ileal Crohn's disease in a population-based cohort.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 16
- Has genotype
- Has population
- Has Report GE
- Uses omim
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Affy500k
- On chip Ancestry v2
- On chip FTDNA2
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip Ancestry v2c
- On chip Ancestry v2d
