rs8178990
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in complete genomics |
| Make rs8178990(C;T) |
| Make rs8178990(T;T) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 10 |
| Position | 49622125 |
| Gene | CHAT |
| is a | snp |
| is | mentioned by |
| dbSNP | rs8178990 |
| dbSNP (classic) | rs8178990 |
| ClinGen | rs8178990 |
| ebi | rs8178990 |
| HLI | rs8178990 |
| Exac | rs8178990 |
| Gnomad | rs8178990 |
| Varsome | rs8178990 |
| LitVar | rs8178990 |
| Map | rs8178990 |
| PheGenI | rs8178990 |
| Biobank | rs8178990 |
| 1000 genomes | rs8178990 |
| hgdp | rs8178990 |
| ensembl | rs8178990 |
| geneview | rs8178990 |
| scholar | rs8178990 |
| rs8178990 | |
| pharmgkb | rs8178990 |
| gwascentral | rs8178990 |
| openSNP | rs8178990 |
| 23andMe | rs8178990 |
| SNPshot | rs8178990 |
| SNPdbe | rs8178990 |
| MSV3d | rs8178990 |
| GWAS Ctlg | rs8178990 |
| GMAF | 0.03673 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 21883924
] Genetic variants in the choline acetyltransferase (ChAT) gene are modestly associated with normal cognitive function in the elderly
[PMID 20383528] Replication and extension of association of choline acetyltransferase with nicotine dependence in European and African American smokers.
| ClinVar | |
|---|---|
| Risk | rs8178990(T;T) |
| Alt | rs8178990(T;T) |
| Reference | Rs8178990(C;C) |
| Significance | Other |
| Disease | not specified |
| Variation | info |
| Gene | CHAT |
| CLNDBN | not specified |
| Reversed | 0 |
| HGVS | NC_000010.10:g.50830171C>T |
| CLNSRC | UniProtKB (protein) |
| CLNACC | RCV000116699.4, |
