rs885479
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 2 | lighter skin color |
| (G;G) | 2 | darker skin color |
| Make rs885479(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 89919746 |
| Gene | MC1R |
| is a | snp |
| is | mentioned by |
| dbSNP | rs885479 |
| dbSNP (classic) | rs885479 |
| ClinGen | rs885479 |
| ebi | rs885479 |
| HLI | rs885479 |
| Exac | rs885479 |
| Gnomad | rs885479 |
| Varsome | rs885479 |
| LitVar | rs885479 |
| Map | rs885479 |
| PheGenI | rs885479 |
| Biobank | rs885479 |
| 1000 genomes | rs885479 |
| hgdp | rs885479 |
| ensembl | rs885479 |
| geneview | rs885479 |
| scholar | rs885479 |
| rs885479 | |
| pharmgkb | rs885479 |
| gwascentral | rs885479 |
| openSNP | rs885479 |
| 23andMe | rs885479 |
| SNPshot | rs885479 |
| SNPdbe | rs885479 |
| MSV3d | rs885479 |
| GWAS Ctlg | rs885479 |
| GMAF | 0.2401 |
| Max Magnitude | 2 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 23744330] [Association study of MC1R gene polymorphisms with freckles in Chinese Han population from Chengdu]
[PMID 17999355
] A genomewide association study of skin pigmentation in a South Asian population.
[PMID 19503611] The role of geography in human adaptation.
[PMID 20042077] Genetic determinants of hair and eye colours in the Scottish and Danish populations.
[PMID 21052032] Sequence polymorphisms of MC1R gene and their association with depression and antidepressant response.
[PMID 23771755] Improved eye- and skin-color prediction based on 8 SNPs.
[PMID 27488084] Melanocortin-1 Receptor Polymorphisms and the Risk of Complicated Sepsis After Trauma: A Candidate Gene Association Study.
| ClinVar | |
|---|---|
| Risk | Rs885479(A;A) |
| Alt | Rs885479(A;A) |
| Reference | Rs885479(G;G) |
| Significance | Non-pathogenic |
| Disease | not specified Malignant Melanoma Susceptibility |
| Variation | info |
| Gene | MC1R |
| CLNDBN | not specified Malignant Melanoma Susceptibility |
| Reversed | 0 |
| HGVS | NC_000016.9:g.89986154G>A |
| CLNSRC | |
| CLNACC | RCV000248045.1, RCV000263355.1, |
[PMID 31488411] MC1R Variation in a New Mexico Population.
