rs928302
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in complete genomics |
| Make rs928302(C;T) |
| Make rs928302(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 21 |
| Position | 42389975 |
| Gene | TMPRSS3 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs928302 |
| dbSNP (classic) | rs928302 |
| ClinGen | rs928302 |
| ebi | rs928302 |
| HLI | rs928302 |
| Exac | rs928302 |
| Gnomad | rs928302 |
| Varsome | rs928302 |
| LitVar | rs928302 |
| Map | rs928302 |
| PheGenI | rs928302 |
| Biobank | rs928302 |
| 1000 genomes | rs928302 |
| hgdp | rs928302 |
| ensembl | rs928302 |
| geneview | rs928302 |
| scholar | rs928302 |
| rs928302 | |
| pharmgkb | rs928302 |
| gwascentral | rs928302 |
| openSNP | rs928302 |
| 23andMe | rs928302 |
| SNPshot | rs928302 |
| SNPdbe | rs928302 |
| MSV3d | rs928302 |
| GWAS Ctlg | rs928302 |
| GMAF | 0.1175 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| ClinVar | |
|---|---|
| Risk | rs928302(T;T) |
| Alt | rs928302(T;T) |
| Reference | Rs928302(C;C) |
| Significance | Probable-non-pathogenic |
| Disease | not specified Nonsyndromic Hearing Loss |
| Variation | info |
| Gene | TMPRSS3 |
| CLNDBN | not specified Nonsyndromic Hearing Loss, Recessive |
| Reversed | 0 |
| HGVS | NC_000021.8:g.43810084C>T |
| CLNSRC | UniProtKB (protein) |
| CLNACC | RCV000039342.3, RCV000295968.1, |
[PMID 18817904
] Japanese population structure, based on SNP genotypes from 7003 individuals compared to other ethnic groups: effects on population-based association studies.
[PMID 11137999] Insertion of beta-satellite repeats identifies a transmembrane protease causing both congenital and childhood onset autosomal recessive deafness.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 21
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d
