rs9909104
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs9909104(C;C) |
| Make rs9909104(C;T) |
| Make rs9909104(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 18344707 |
| Gene | SHMT1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs9909104 |
| dbSNP (classic) | rs9909104 |
| ClinGen | rs9909104 |
| ebi | rs9909104 |
| HLI | rs9909104 |
| Exac | rs9909104 |
| Gnomad | rs9909104 |
| Varsome | rs9909104 |
| LitVar | rs9909104 |
| Map | rs9909104 |
| PheGenI | rs9909104 |
| Biobank | rs9909104 |
| 1000 genomes | rs9909104 |
| hgdp | rs9909104 |
| ensembl | rs9909104 |
| geneview | rs9909104 |
| scholar | rs9909104 |
| rs9909104 | |
| pharmgkb | rs9909104 |
| gwascentral | rs9909104 |
| openSNP | rs9909104 |
| 23andMe | rs9909104 |
| SNPshot | rs9909104 |
| SNPdbe | rs9909104 |
| MSV3d | rs9909104 |
| GWAS Ctlg | rs9909104 |
| GMAF | 0.3122 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 18381459
] 829 Caucasian cases with primary epithelial ovarian cancer and 941 frequency-matched unaffected controls
- Each copy of the minor allele in SHMT1 intron 5 A>G (rs9909104) was associated with epithelial ovarian cancer [odds ratio (OR), 1.2; 95% confidence interval (95% CI), 1.0-1.4; P trend = 0.02; FPRP = 0.16] and a 5-SNP SHMT1 haplotype was associated with decreased risk (P = 0.01; FPRP = 0.09).
[PMID 23940529] Roles of genetic polymorphisms in the folate pathway in childhood acute lymphoblastic leukemia evaluated by bayesian relevance and effect size analysis
