Difference between revisions of "Rs3093662"
SNPediaBot (talk | contribs) m (added 11 PMIDs found via PubmedBCP) |
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{{Rsnum | {{Rsnum | ||
|rsid=3093662 | |rsid=3093662 | ||
| + | |Gene=TNF | ||
|Chromosome=6 | |Chromosome=6 | ||
| + | |position=31544189 | ||
|Orientation=plus | |Orientation=plus | ||
| + | |GMAF=0.0742 | ||
|geno1=(A;A) | |geno1=(A;A) | ||
|geno2=(A;G) | |geno2=(A;G) | ||
|geno3=(G;G) | |geno3=(G;G) | ||
| − | |||
| − | |||
|Assembly=GRCh37 | |Assembly=GRCh37 | ||
|GenomeBuild=37.1 | |GenomeBuild=37.1 | ||
|dbSNPBuild=131 | |dbSNPBuild=131 | ||
| − | }}{{ population diversity | + | }} |
| + | {{ population diversity | ||
| geno1=(A;A) | | geno1=(A;A) | ||
| geno2=(A;G) | | geno2=(A;G) | ||
Revision as of 14:14, 11 August 2012
| Orientation | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in complete genomics |
| Make rs3093662(A;G) |
| Make rs3093662(G;G) |
| Reference | GRCh37 37.1/131 |
| Chromosome | 6 |
| Position | 31544189 |
| Gene | TNF |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3093662 |
| dbSNP (classic) | rs3093662 |
| ClinGen | rs3093662 |
| ebi | rs3093662 |
| HLI | rs3093662 |
| Exac | rs3093662 |
| Gnomad | rs3093662 |
| Varsome | rs3093662 |
| LitVar | rs3093662 |
| Map | rs3093662 |
| PheGenI | rs3093662 |
| Biobank | rs3093662 |
| 1000 genomes | rs3093662 |
| hgdp | rs3093662 |
| ensembl | rs3093662 |
| geneview | rs3093662 |
| scholar | rs3093662 |
| rs3093662 | |
| pharmgkb | rs3093662 |
| gwascentral | rs3093662 |
| openSNP | rs3093662 |
| 23andMe | rs3093662 |
| SNPshot | rs3093662 |
| SNPdbe | rs3093662 |
| MSV3d | rs3093662 |
| GWAS Ctlg | rs3093662 |
| GMAF | 0.0742 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 20459604] Large-scale association analysis of TNF/LTA gene region polymorphisms in type 2 diabetes
[PMID 21463712] Differential serum cytokine levels are associated with cytokine gene polymorphisms in North Indians with active pulmonary tuberculosis
[PMID 18620570] The TNFalpha gene relates to clinical phenotype in alpha-1-antitrypsin deficiency.
[PMID 18640487] Association of donor inflammation- and apoptosis-related genotypes and delayed allograft function after kidney transplantation.
[PMID 18805939] Functional genetic polymorphisms and female reproductive disorders: part II--endometriosis.
[PMID 19107206] Distinct genetic loci control plasma HIV-RNA and cellular HIV-DNA levels in HIV-1 infection: the ANRS Genome Wide Association 01 study.
[PMID 19167443] Family-based analysis of tumor necrosis factor and lymphotoxin-alpha tag polymorphisms with type 1 diabetes in the population of South Croatia.
[PMID 19281305] Tumor necrosis factor and lymphotoxin-alpha polymorphisms and severe malaria in African populations.
[PMID 19409079] Association of MICA with rheumatoid arthritis independent of known HLA-DRB1 risk alleles in a family-based and a case control study.
[PMID 19505919] Toll-like receptor signaling pathway variants and prostate cancer mortality.
[PMID 20018062] Identification of genes and haplotypes that predict rheumatoid arthritis using random forests.
[PMID 20617178] Leprosy and the adaptation of human toll-like receptor 1.
[PMID 21320344] Evaluation of genetic susceptibility to childhood allergy and asthma in an African American urban population.
