rs2040639
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs2040639(A;A) |
| Make rs2040639(A;G) |
| Make rs2040639(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 7 |
| Position | 152678103 |
| Gene | XRCC2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2040639 |
| dbSNP (classic) | rs2040639 |
| ClinGen | rs2040639 |
| ebi | rs2040639 |
| HLI | rs2040639 |
| Exac | rs2040639 |
| Gnomad | rs2040639 |
| Varsome | rs2040639 |
| LitVar | rs2040639 |
| Map | rs2040639 |
| PheGenI | rs2040639 |
| Biobank | rs2040639 |
| 1000 genomes | rs2040639 |
| hgdp | rs2040639 |
| ensembl | rs2040639 |
| geneview | rs2040639 |
| scholar | rs2040639 |
| rs2040639 | |
| pharmgkb | rs2040639 |
| gwascentral | rs2040639 |
| openSNP | rs2040639 |
| 23andMe | rs2040639 |
| SNPshot | rs2040639 |
| SNPdbe | rs2040639 |
| MSV3d | rs2040639 |
| GWAS Ctlg | rs2040639 |
| GMAF | 0.3705 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
18067C>T possibly related to non-Hodgkin lymphoma
[PMID 18410587] rs2040639-AG, contribute to oral cancer risk.
pseudo-haplotype with AG-CC genotypes in
- 2.45x risk rs2040639-rs861539
- 5.03x risk rs2040639-rs861539-rs2075685
- 10.10x risk rs2040639-rs861539-rs2075685-rs1799782
[PMID 22726897] Single nucleotide polymorphism barcoding to evaluate oral cancer risk using odds ratio-based genetic algorithms
[PMID 19690184
] Genetic variants in XRCC2: new insights into colorectal cancer tumorigenesis.
[PMID 29038438] Haplotype analysis of XRCC2 gene polymorphisms and association with increased risk of head and neck cancer.
