rs2075685
| Orientation | plus |
| Stabilized | plus |
| Make rs2075685(G;G) |
| Make rs2075685(G;T) |
| Make rs2075685(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 5 |
| Position | 83076846 |
| Gene | TMEM167A, XRCC4 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2075685 |
| dbSNP (classic) | rs2075685 |
| ClinGen | rs2075685 |
| ebi | rs2075685 |
| HLI | rs2075685 |
| Exac | rs2075685 |
| Gnomad | rs2075685 |
| Varsome | rs2075685 |
| LitVar | rs2075685 |
| Map | rs2075685 |
| PheGenI | rs2075685 |
| Biobank | rs2075685 |
| 1000 genomes | rs2075685 |
| hgdp | rs2075685 |
| ensembl | rs2075685 |
| geneview | rs2075685 |
| scholar | rs2075685 |
| rs2075685 | |
| pharmgkb | rs2075685 |
| gwascentral | rs2075685 |
| openSNP | rs2075685 |
| 23andMe | rs2075685 |
| SNPshot | rs2075685 |
| SNPdbe | rs2075685 |
| MSV3d | rs2075685 |
| GWAS Ctlg | rs2075685 |
| GMAF | 0.3852 |
| Max Magnitude | 0 |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
18067C>T possibly related to non-Hodgkin lymphoma
[PMID 18410587] rs2040639-AG, contribute to oral cancer risk.
pseudo-haplotype with AG-CC genotypes in
- 2.45x risk rs2040639-rs861539
- 5.03x risk rs2040639-rs861539-rs2075685
- 10.10x risk rs2040639-rs861539-rs2075685-rs1799782
[PMID 19443403] Significant Association of an XRCC4 Single Nucleotide Polymorphism with Bladder Cancer Susceptibility in Taiwan; note: no association found for this SNP
[PMID 19729825] Lung cancer susceptibility and genetic polymorphism of DNA repair gene XRCC4 in Taiwan
[PMID 20332465] Significant association of XRCC4 single nucleotide polymorphisms with childhood leukemia in Taiwan
[PMID 20683005] Colorectal Cancer and Genetic Polymorphism of DNA Double-strand Break Repair Gene XRCC4 in Taiwan
[PMID 21296624
] An analysis of single nucleotide polymorphisms of 125 DNA repair genes in the Texas genome-wide association study of lung cancer with a replication for the XRCC4 SNPs
[PMID 22726897] Single nucleotide polymorphism barcoding to evaluate oral cancer risk using odds ratio-based genetic algorithms
[PMID 19276285] Associations between single nucleotide polymorphisms in double-stranded DNA repair pathway genes and familial breast cancer.
[PMID 27508978] Genetic effects of XRCC4 and ligase IV genes on human glioma.
