rs2111485
| Orientation | plus |
| Stabilized | plus |
| Make rs2111485(A;A) |
| Make rs2111485(A;G) |
| Make rs2111485(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 162254026 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2111485 |
| dbSNP (classic) | rs2111485 |
| ClinGen | rs2111485 |
| ebi | rs2111485 |
| HLI | rs2111485 |
| Exac | rs2111485 |
| Gnomad | rs2111485 |
| Varsome | rs2111485 |
| LitVar | rs2111485 |
| Map | rs2111485 |
| PheGenI | rs2111485 |
| Biobank | rs2111485 |
| 1000 genomes | rs2111485 |
| hgdp | rs2111485 |
| ensembl | rs2111485 |
| geneview | rs2111485 |
| scholar | rs2111485 |
| rs2111485 | |
| pharmgkb | rs2111485 |
| gwascentral | rs2111485 |
| openSNP | rs2111485 |
| 23andMe | rs2111485 |
| SNPshot | rs2111485 |
| SNPdbe | rs2111485 |
| MSV3d | rs2111485 |
| GWAS Ctlg | rs2111485 |
| GMAF | 0.3632 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 22561518 ]
|
| Trait | |
| Title | Genome-wide association analyses identify 13 new susceptibility loci for generalized vitiligo. |
| Risk Allele | G |
| P-val | 5E-15 |
| Odds Ratio | 1.3000 None |
[PMID 18071670] The association between the IFIH1 locus and type 1 diabetes.
[PMID 18285833] IFIH1-GCA-KCNH7 locus: influence on multiple sclerosis risk.
[PMID 18840781] Follow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes.
[PMID 18927125] IFIH1 polymorphisms are significantly associated with type 1 diabetes and IFIH1 gene expression in peripheral blood mononuclear cells.
[PMID 19956101] Overview of the Rapid Response data.
[PMID 19956106] Analysis of 19 genes for association with type I diabetes in the Type I Diabetes Genetics Consortium families.
[PMID 19956109] The Type I Diabetes Genetics Consortium 'Rapid Response' family-based candidate gene study: strategy, genes selection, and main outcome.
[PMID 19961590] The rs1990760 polymorphism within the IFIH1 locus is not associated with Graves' disease, Hashimoto's thyroiditis and Addison's disease.
[PMID 21270278] An interferon-induced helicase (IFIH1) gene polymorphism associates with different rates of progression from autoimmunity to type 1 diabetes.
| GWAS snp | |
|---|---|
| PMID | [PMID 23128233]
|
| Trait | Inflammatory bowel disease |
| Title | Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. |
| Risk Allele | A |
| P-val | 2E-8 |
| Odds Ratio | 1.07 [1.035-1.097] |
[PMID 22789000] Polymorphisms in the interferon-induced helicase (IFIH1) locus and susceptibility to Addison's disease
[PMID 25515714] Cumulative effect of IFIH1 variants and increased gene expression associated with type 1 diabetes
[PMID 30761886] The role of IFIH1 gene rs1990760 and rs2111485 single-nucleotide polymorphisms in generalized vitiligo predisposition
