rs2227311
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (T;T) | 0 |
| Make rs2227311(C;C) |
| Make rs2227311(C;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 13 |
| Position | 48412896 |
| Gene | LPAR6, RB1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2227311 |
| dbSNP (classic) | rs2227311 |
| ClinGen | rs2227311 |
| ebi | rs2227311 |
| HLI | rs2227311 |
| Exac | rs2227311 |
| Gnomad | rs2227311 |
| Varsome | rs2227311 |
| LitVar | rs2227311 |
| Map | rs2227311 |
| PheGenI | rs2227311 |
| Biobank | rs2227311 |
| 1000 genomes | rs2227311 |
| hgdp | rs2227311 |
| ensembl | rs2227311 |
| geneview | rs2227311 |
| scholar | rs2227311 |
| rs2227311 | |
| pharmgkb | rs2227311 |
| gwascentral | rs2227311 |
| openSNP | rs2227311 |
| 23andMe | rs2227311 |
| SNPshot | rs2227311 |
| SNPdbe | rs2227311 |
| MSV3d | rs2227311 |
| GWAS Ctlg | rs2227311 |
| GMAF | 0.1019 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
This SNP has been linked to another SNP, rs4151620 which has been linked to ovarian cancer [PMID 17047088].
More specifically: rs2227311(C) alleles were found to be perfectly correlated to rs4151620(G) alleles, and carriers of two rs4151620(G) alleles have a 5X reduced risk of developing ovarian cancer compared to carriers of two rs4151620(C) alleles, in a survey of ~5,000 women from the US, UK, and Denmark. [PMID 17047088]
