rs2305160

Orientation

minus

Stabilized

minus

Make rs2305160(C;C)

Make rs2305160(C;T)

Make rs2305160(T;T)

Reference

GRCh38 38.1/141

Chromosome

2

Position

100974842

Gene	LOC101927142, NPAS2

is a	snp
is	mentioned by
dbSNP	rs2305160
dbSNP (classic)	rs2305160
ClinGen	rs2305160
ebi	rs2305160
HLI	rs2305160
Exac	rs2305160
Gnomad	rs2305160
Varsome	rs2305160
LitVar	rs2305160
Map	rs2305160
PheGenI	rs2305160
Biobank	rs2305160
1000 genomes	rs2305160
hgdp	rs2305160
ensembl	rs2305160
geneview	rs2305160
scholar	rs2305160
google	rs2305160
pharmgkb	rs2305160
gwascentral	rs2305160
openSNP	rs2305160
23andMe	rs2305160
SNPshot	rs2305160
SNPdbe	rs2305160
MSV3d	rs2305160
GWAS Ctlg	rs2305160

GMAF

0.2314

Max Magnitude

0

?	(C;C) (C;T) (T;T)	28

[PMID 21140207] A variant affecting miRNAs binding in the circadian gene Neuronal PAS domain protein 2 (NPAS2) is not associated with breast cancer risk

[PMID 17096334] Ala394Thr polymorphism in the clock gene NPAS2: a circadian modifier for the risk of non-Hodgkin's lymphoma.

[PMID 17984998] Variants in circadian genes and prostate cancer risk: a population-based study in China.

[PMID 18990770] Correlation between circadian gene variants and serum levels of sex steroids and insulin-like growth factor-I.

[PMID 19470168] NPAS2 and PER2 are linked to risk factors of the metabolic syndrome.

[PMID 20180986] CLOCK is suggested to associate with comorbid alcohol use and depressive disorders.

[PMID 20368993] ARNTL (BMAL1) and NPAS2 gene variants contribute to fertility and seasonality.

[PMID 24754267] Functional polymorphisms in NPAS2 gene are associated with overall survival in TACE-treated hepatocellular carcinoma patients

[PMID 25227809] Lack of Association of the NPAS2 Gene Ala394Thr Polymorphism (rs2305160:G>A) with Risk of Chronic Lymphocytic Leukemia

[PMID 24824748] Association between restless legs syndrome and CLOCK and NPAS2 gene polymorphisms in schizophrenia