rs3117583

Orientation

minus

Stabilized

minus

Make rs3117583(C;C)

Make rs3117583(C;T)

Make rs3117583(T;T)

Reference

GRCh38 38.1/141

Chromosome

6

Position

31651799

Gene	APOM, BAG6

is a	snp
is	mentioned by
dbSNP	rs3117583
dbSNP (classic)	rs3117583
ClinGen	rs3117583
ebi	rs3117583
HLI	rs3117583
Exac	rs3117583
Gnomad	rs3117583
Varsome	rs3117583
LitVar	rs3117583
Map	rs3117583
PheGenI	rs3117583
Biobank	rs3117583
1000 genomes	rs3117583
hgdp	rs3117583
ensembl	rs3117583
geneview	rs3117583
scholar	rs3117583
google	rs3117583
pharmgkb	rs3117583
gwascentral	rs3117583
openSNP	rs3117583
23andMe	rs3117583
SNPshot	rs3117583
SNPdbe	rs3117583
MSV3d	rs3117583
GWAS Ctlg	rs3117583

GMAF

0.1309

Max Magnitude

0

?	(C;C) (C;T) (T;T)	28

[15743917‎?dopt=Abstract PMID 15743917‎] HLA-B*5801 allele as a genetic marker for severe cutaneous adverse reactions caused by allopurinol.

"In particular, three SNPs in the MHC class III region have P values <10-7 (-log10 P value > 7, Fig. 1). These SNPs were rs3117583 of BAT3 (encoding for HLA-B associated transcript 3), rs1150793 of MSH5 (encoding mutS homolog), and rs2855804 of MICB (encoding MHC class I polypeptide-related sequence)."

[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.

[PMID 19143813] Confirmation of HLA class II independent type 1 diabetes associations in the major histocompatibility complex including HLA-B and HLA-A.

[PMID 26083016] Accuracy of SNPs to predict risk of HLA alleles associated with drug-induced hypersensitivity events across racial groups