rs3762271
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| Make rs3762271(A;A) |
| Make rs3762271(A;C) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 197101312 |
| Gene | ASPM |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3762271 |
| dbSNP (classic) | rs3762271 |
| ClinGen | rs3762271 |
| ebi | rs3762271 |
| HLI | rs3762271 |
| Exac | rs3762271 |
| Gnomad | rs3762271 |
| Varsome | rs3762271 |
| LitVar | rs3762271 |
| Map | rs3762271 |
| PheGenI | rs3762271 |
| Biobank | rs3762271 |
| 1000 genomes | rs3762271 |
| hgdp | rs3762271 |
| ensembl | rs3762271 |
| geneview | rs3762271 |
| scholar | rs3762271 |
| rs3762271 | |
| pharmgkb | rs3762271 |
| gwascentral | rs3762271 |
| openSNP | rs3762271 |
| 23andMe | rs3762271 |
| SNPshot | rs3762271 |
| SNPdbe | rs3762271 |
| MSV3d | rs3762271 |
| GWAS Ctlg | rs3762271 |
| GMAF | 0.2461 |
| Max Magnitude | 0 |
| ? | (A;A) (A;C) (C;C) | 28 |
|---|---|---|
|
| ||
rs3762271 is an A/C SNP located in the ASPM gene. The A-allele of this SNP as well as the G-allele of rs964201 another SNP located in the ASPM gene and rs2442496 a SNP in the MCPH1 gene arose approximately 50,000 years ago and show strong positive selection in the lineage leading to humans. [PMID 16151010] A comment is provided by g2b2mh.
| ClinVar | |
|---|---|
| Risk | rs3762271(A;A) rs3762271(T;T) |
| Alt | rs3762271(A;A) rs3762271(T;T) |
| Reference | Rs3762271(C;C) |
| Significance | Non-pathogenic |
| Disease | Primary autosomal recessive microcephaly 5 not specified Primary Microcephaly |
| Variation | info |
| Gene | ASPM |
| CLNDBN | Primary autosomal recessive microcephaly 5 not specified Primary Microcephaly, Recessive |
| Reversed | 1 |
| HGVS | NC_000001.10:g.197070442G>T |
| CLNSRC | UniProtKB (protein) |
| CLNACC | RCV000020801.1, RCV000145204.2, RCV000295618.1, |
