rs964201
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 2 | |
| (A;G) | 1.1 | |
| (G;G) | 0 | common in complete genomics |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 197101771 |
| Gene | ASPM |
| is a | snp |
| is | mentioned by |
| dbSNP | rs964201 |
| dbSNP (classic) | rs964201 |
| ClinGen | rs964201 |
| ebi | rs964201 |
| HLI | rs964201 |
| Exac | rs964201 |
| Gnomad | rs964201 |
| Varsome | rs964201 |
| LitVar | rs964201 |
| Map | rs964201 |
| PheGenI | rs964201 |
| Biobank | rs964201 |
| 1000 genomes | rs964201 |
| hgdp | rs964201 |
| ensembl | rs964201 |
| geneview | rs964201 |
| scholar | rs964201 |
| rs964201 | |
| pharmgkb | rs964201 |
| gwascentral | rs964201 |
| openSNP | rs964201 |
| 23andMe | rs964201 |
| SNPshot | rs964201 |
| SNPdbe | rs964201 |
| MSV3d | rs964201 |
| GWAS Ctlg | rs964201 |
| GMAF | 0.002755 |
| Max Magnitude | 2 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
rs964201 is an A/G SNP located in the ASPM gene. The G-allele of this SNP as well as the A-allele of rs3762271 another SNP located in the ASPM gene and rs2442496 a SNP in the MCPH1 gene arose approximately 50,000 years ago and show strong positive selection in the lineage leading to humans. [PMID 16151010] A comment is found at g2b2mh.
| ClinVar | |
|---|---|
| Risk | Rs964201(G;G) |
| Alt | Rs964201(G;G) |
| Reference | Rs964201(A;A) |
| Significance | Non-pathogenic |
| Disease | Primary autosomal recessive microcephaly 5 not specified Primary Microcephaly |
| Variation | info |
| Gene | ASPM |
| CLNDBN | Primary autosomal recessive microcephaly 5 not specified Primary Microcephaly, Recessive |
| Reversed | 0 |
| HGVS | NC_000001.10:g.197070901A>G |
| CLNSRC | UniProtKB (protein) |
| CLNACC | RCV000020789.1, RCV000145183.6, RCV000332016.1, |
