rs804280
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| Make rs804280(G;T) |
| Make rs804280(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 8 |
| Position | 11755189 |
| Gene | GATA4 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs804280 |
| dbSNP (classic) | rs804280 |
| ClinGen | rs804280 |
| ebi | rs804280 |
| HLI | rs804280 |
| Exac | rs804280 |
| Gnomad | rs804280 |
| Varsome | rs804280 |
| LitVar | rs804280 |
| Map | rs804280 |
| PheGenI | rs804280 |
| Biobank | rs804280 |
| 1000 genomes | rs804280 |
| hgdp | rs804280 |
| ensembl | rs804280 |
| geneview | rs804280 |
| scholar | rs804280 |
| rs804280 | |
| pharmgkb | rs804280 |
| gwascentral | rs804280 |
| openSNP | rs804280 |
| 23andMe | rs804280 |
| SNPshot | rs804280 |
| SNPdbe | rs804280 |
| MSV3d | rs804280 |
| GWAS Ctlg | rs804280 |
| GMAF | 0.2989 |
| Max Magnitude | 0 |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23049088] |
| Trait | Myopia (pathological) |
| Title | A Genome-Wide Association Study Provides Evidence for Association of Chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with High Myopia in the French Population. |
| Risk Allele | |
| P-val | 4E-6 |
| Odds Ratio | NR NR |
[PMID 17592645
] Mutations in the 3'-untranslated region of GATA4 as molecular hotspots for congenital heart disease (CHD).
| ClinVar | |
|---|---|
| Risk | rs804280(T;T) |
| Alt | rs804280(T;T) |
| Reference | Rs804280(G;G) |
| Significance | Unknown |
| Disease | not provided |
| Variation | info |
| Gene | GATA4 |
| CLNDBN | not provided |
| Reversed | 1 |
| HGVS | NC_000008.10:g.11612698C>A |
| CLNSRC | ClinVar |
| CLNACC | RCV000128537.1, |
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 8
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip NatGeo2
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d
