rs804280
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in clinvar |
Make rs804280(G;T) |
Make rs804280(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 8 |
Position | 11755189 |
Gene | GATA4 |
is a | snp |
is | mentioned by |
dbSNP | rs804280 |
dbSNP (classic) | rs804280 |
ClinGen | rs804280 |
ebi | rs804280 |
HLI | rs804280 |
Exac | rs804280 |
Gnomad | rs804280 |
Varsome | rs804280 |
LitVar | rs804280 |
Map | rs804280 |
PheGenI | rs804280 |
Biobank | rs804280 |
1000 genomes | rs804280 |
hgdp | rs804280 |
ensembl | rs804280 |
geneview | rs804280 |
scholar | rs804280 |
rs804280 | |
pharmgkb | rs804280 |
gwascentral | rs804280 |
openSNP | rs804280 |
23andMe | rs804280 |
SNPshot | rs804280 |
SNPdbe | rs804280 |
MSV3d | rs804280 |
GWAS Ctlg | rs804280 |
GMAF | 0.2989 |
Max Magnitude | 0 |
? | (G;G) (G;T) (T;T) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 23049088] |
Trait | Myopia (pathological) |
Title | A Genome-Wide Association Study Provides Evidence for Association of Chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with High Myopia in the French Population. |
Risk Allele | |
P-val | 4E-6 |
Odds Ratio | NR NR |
[PMID 17592645] Mutations in the 3'-untranslated region of GATA4 as molecular hotspots for congenital heart disease (CHD).
ClinVar | |
---|---|
Risk | rs804280(T;T) |
Alt | rs804280(T;T) |
Reference | Rs804280(G;G) |
Significance | Unknown |
Disease | not provided |
Variation | info |
Gene | GATA4 |
CLNDBN | not provided |
Reversed | 1 |
HGVS | NC_000008.10:g.11612698C>A |
CLNSRC | ClinVar |
CLNACC | RCV000128537.1, |
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 8
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip NatGeo2
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d