rs1625895
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| Make rs1625895(A;G) |
| Make rs1625895(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 7674797 |
| Gene | TP53 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1625895 |
| dbSNP (classic) | rs1625895 |
| ClinGen | rs1625895 |
| ebi | rs1625895 |
| HLI | rs1625895 |
| Exac | rs1625895 |
| Gnomad | rs1625895 |
| Varsome | rs1625895 |
| LitVar | rs1625895 |
| Map | rs1625895 |
| PheGenI | rs1625895 |
| Biobank | rs1625895 |
| 1000 genomes | rs1625895 |
| hgdp | rs1625895 |
| ensembl | rs1625895 |
| geneview | rs1625895 |
| scholar | rs1625895 |
| rs1625895 | |
| pharmgkb | rs1625895 |
| gwascentral | rs1625895 |
| openSNP | rs1625895 |
| 23andMe | rs1625895 |
| SNPshot | rs1625895 |
| SNPdbe | rs1625895 |
| MSV3d | rs1625895 |
| GWAS Ctlg | rs1625895 |
| GMAF | 0.1373 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
- [PMID 19193430] rs2279744, rs1042522, rs17878362 and rs1625895 associated with high grade endometrial cancer
[PMID 19505915] Association of Genetic Polymorphisms, mRNA Expression of p53 and p21 with Chronic Benzene Poisoning in a Chinese Occupational Population
[PMID 21838531] Crosstalk between the FGFR2 and TP53 genes in breast cancer: data from an association study and epistatic interaction analysis
[PMID 22829776
] A Genome-Wide Association Meta-Analysis of Circulating Sex Hormone–Binding Globulin Reveals Multiple Loci Implicated in Sex Steroid Hormone Regulation
[PMID 12466288] Haplotype and linkage disequilibrium architecture for human cancer-associated genes.
[PMID 16465622] Bladder cancer predisposition: a multigenic approach to DNA-repair and cell-cycle-control genes.
[PMID 17151932] Genetic variation in p53 and ATM haplotypes and risk of glioma and meningioma.
[PMID 17301252] Common genetic variation in TP53 is associated with lung cancer risk and prognosis in African Americans and somatic mutations in lung tumors.
[PMID 17428325] Common variants in the ATM, BRCA1, BRCA2, CHEK2 and TP53 cancer susceptibility genes are unlikely to increase breast cancer risk.
[PMID 17449902] Genetic variation in TP53 and risk of breast cancer in a population-based case control study.
[PMID 17624591] Genetic variation of TP53, polycyclic aromatic hydrocarbon-related exposures, and breast cancer risk among women on Long Island, New York.
[PMID 17908995] Genetic variants in cell cycle control pathway confer susceptibility to lung cancer.
[PMID 18640487] Association of donor inflammation- and apoptosis-related genotypes and delayed allograft function after kidney transplantation.
[PMID 18798306] Construction of a high resolution linkage disequilibrium map to evaluate common genetic variation in TP53 and neural tube defect risk in an Irish population.
[PMID 18854777] Germline genetic variations in drug action pathways predict clinical outcomes in advanced lung cancer treated with platinum-based chemotherapy.
[PMID 19276285] Associations between single nucleotide polymorphisms in double-stranded DNA repair pathway genes and familial breast cancer.
[PMID 19276375] Single nucleotide polymorphisms in the TP53 region and susceptibility to invasive epithelial ovarian cancer.
[PMID 19423538] Common genetic variation in TP53 and risk of human papillomavirus persistence and progression to CIN3/cancer revisited.
[PMID 19426493] A case-control study on the combined effects of p53 and p73 polymorphisms on head and neck cancer risk in an Italian population.
[PMID 21810023] Coordination of TP53 abnormalities in breast cancer: data from analysis of TP53 polymorphisms, loss of heterozygosity, methylation, and mutations.
[PMID 23360829] Association between polymorphisms in the genes for tumor suppressor protein p53 and its regulator NAD(P)H: quinone oxidoreductase 1 (NQO1) and schizophrenia in a Syrian study cohort
[PMID 25394431] Influence of p53 (rs1625895) polymorphism in kidney transplant recipients
| ClinVar | |
|---|---|
| Risk | rs1625895(C;C) rs1625895(G;G) |
| Alt | rs1625895(C;C) rs1625895(G;G) |
| Reference | Rs1625895(A;A) |
| Significance | Non-pathogenic |
| Disease | not specified |
| Variation | info |
| Gene | TP53 |
| CLNDBN | not specified |
| Reversed | 1 |
| HGVS | NC_000017.10:g.7578115T>C |
| CLNSRC | |
| CLNACC | RCV000242317.1, |
[PMID 31686737] TP53 rs1625895 is Related to Breast Cancer Incidence and Early Death in Iranian Population.
